C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173928-ENSG00000187266 CGP 9606 19:11374685-11384342
GeneTranscriptPositionBiotype
ENSG00000173928 (SWSAP1)
SWIM-type zinc finger 7 associated protein 1 		ENST00000312423 (SWSAP1-001) 11374685-11376951 protein_coding
ENSG00000187266 (EPOR)
erythropoietin receptor 		ENST00000222139 (EPOR-001) 11377205-11384312 protein_coding
ENST00000586890 (EPOR-004) 11377874-11384284 nonsense_mediated_decay
ENST00000588681 (EPOR-006) 11377763-11384342 retained_intron
ENST00000588859 (EPOR-002) 11377866-11384284 nonsense_mediated_decay
ENST00000589402 (EPOR-008) 11380884-11383454 retained_intron
ENST00000590927 (EPOR-007) 11378256-11381238 retained_intron
ENST00000591958 (EPOR-003) 11377866-11384284 nonsense_mediated_decay
ENST00000592375 (EPOR-005) 11377625-11384312 protein_coding
ENSG00000205517 (RGL3)
ral guanine nucleotide dissociation stimulator-like 3 		ENST00000380456 (RGL3-001) 11394057-11419342 protein_coding
ENST00000393423 (RGL3-002) 11394325-11419328 protein_coding
ENST00000453604 (RGL3-004) 11402228-11419314 retained_intron
ENST00000561570 (RGL3-009) 11416850-11419317 processed_transcript
ENST00000561687 (RGL3-016) 11406824-11416234 retained_intron
ENST00000562663 (RGL3-006) 11384341-11419273 nonsense_mediated_decay
ENST00000563436 (RGL3-017) 11416007-11416830 processed_transcript
ENST00000563726 (RGL3-007) 11384512-11419310 nonsense_mediated_decay
ENST00000565895 (RGL3-012) 11405212-11406943 retained_intron
ENST00000566153 (RGL3-008) 11394056-11411270 retained_intron
ENST00000566919 (RGL3-013) 11397244-11397769 retained_intron
ENST00000567080 (RGL3-015) 11416039-11419314 protein_coding
ENST00000567431 (RGL3-011) 11415937-11418573 protein_coding
ENST00000568420 (RGL3-010) 11416463-11419305 retained_intron
ENST00000568628 (RGL3-014) 11394064-11397546 processed_transcript
ENST00000569439 (RGL3-003) 11406736-11419317 retained_intron
ENST00000589032 (RGL3-018) 11402078-11406602 nonsense_mediated_decay
ENSG00000267277 (CTD-2342J14.6)
 ENST00000590399 (CTD-2342J14.6-001) 11368123-11374935 antisense
CIL_00016B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051238-ENSMUSG00000006235 CGP 10090 9:21955753-21963576
GeneTranscriptPositionBiotype
ENSMUSG00000006235 (Epor)
erythropoietin receptor 		ENSMUST00000006397 (Epor-201) 21958899-21963576 protein_coding
ENSMUSG00000051238 (Swsap1)
SWIM type zinc finger 7 associated protein 1 		ENSMUST00000053583 (Swsap1-201) 21955753-21958270 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016B_0001ENSG00000173928ENST00000312423ENSG00000187266ENST00000222139ENST00000586890ENST00000588681ENST00000588859ENST00000589402ENST00000590927ENST00000591958ENST00000592375ENSG00000205517ENST00000380456ENST00000393423ENST00000453604ENST00000561570ENST00000561687ENST00000562663ENST00000563436ENST00000563726ENST00000565895ENST00000566153ENST00000566919ENST00000567080ENST00000567431ENST00000568420ENST00000568628ENST00000569439ENST00000589032ENSG00000267277ENST00000590399CIL_00016B_0002ENSMUSG00000006235ENSMUST00000006397ENSMUSG00000051238ENSMUST00000053583
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016B_0001ENSG00000173928ENST00000312423ENSG00000187266ENST00000222139ENST00000586890ENST00000588681ENST00000588859ENST00000590927ENST00000591958ENST00000592375ENSG00000205517ENST00000380456ENST00000393423ENST00000561570ENST00000566153ENST00000567431ENST00000568628ENST00000569439ENSG00000267277ENST00000590399CIL_00016B_0002ENSMUSG00000006235ENSMUST00000006397ENSMUSG00000051238ENSMUST00000053583
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173928 ENST00000312423 0.432±0.00 0.774±0.00 N/A 0.281±0.20 0.448±0.28 0.596±0.19 0.320±0.18 0.869±0.32 0.704±0.53 0.373±0.17 0.301±0.16 0.941±0.46 1.760±0.55 1.456±0.39
ENSG00000187266 ENST00000222139 N/A 1.327±0.00 N/A 0.394±0.00 0.537±0.00 0.549±0.25 0.561±0.36 2.364±1.52 1.441±0.00 1.099±0.00 0.693±0.00 1.824±0.38 3.431±0.78 0.980±0.15
ENST00000586890 N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A 0.690±0.00 N/A 3.381±0.00 N/A N/A
ENST00000588681 N/A N/A N/A N/A 0.938±0.00 N/A 0.945±0.00 N/A N/A N/A N/A N/A 3.980±0.00 1.148±0.00
ENST00000588859 N/A N/A N/A N/A N/A N/A N/A N/A 3.407±0.00 3.981±0.00 N/A 3.431±0.00 8.258±2.16 1.420±0.00
ENST00000589402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590927 N/A N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A
ENST00000591958 N/A N/A N/A N/A N/A 1.283±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592375 N/A N/A N/A N/A 0.817±0.00 0.988±0.00 0.639±0.00 N/A N/A N/A 0.799±0.00 N/A 3.347±0.65 N/A
ENSG00000205517 ENST00000380456 2.744±0.00 0.838±0.00 1.491±0.00 0.568±0.00 0.750±0.00 N/A N/A N/A 1.321±0.00 N/A N/A 2.223±1.21 4.114±1.54 N/A
ENST00000393423 N/A 1.319±0.00 N/A N/A N/A 1.702±0.00 N/A 8.844±0.00 N/A 2.021±0.00 N/A N/A N/A 1.572±0.00
ENST00000453604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561570 N/A N/A N/A N/A N/A 0.525±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566153 N/A N/A N/A N/A 0.673±0.00 N/A 0.596±0.00 4.875±0.00 1.269±0.00 1.542±0.00 N/A 2.619±0.00 N/A 0.931±0.00
ENST00000566919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567431 N/A N/A N/A 0.685±0.00 1.238±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568628 N/A N/A N/A N/A N/A N/A 0.475±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000569439 N/A N/A 2.639±0.00 N/A N/A N/A N/A 0.623±0.00 1.345±0.00 N/A N/A 1.901±0.00 N/A N/A
ENST00000589032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267277 ENST00000590399 N/A N/A N/A 0.972±0.00 N/A N/A 0.255±0.00 N/A N/A N/A N/A N/A N/A 0.884±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006235 ENSMUST00000006397 4.924±3.15 1.029±0.34 0.599±0.03 1.197±0.97 4.989±1.76 0.952±0.23 0.532±0.31 4.085±1.21 49.902±57.87 3.417±0.02 0.164±0.05 0.824±0.29 4.549±2.82 0.325±0.18
ENSMUSG00000051238 ENSMUST00000053583 4.520±0.97 16.810±1.13 2.250±0.04 1.990±0.88 4.831±2.03 6.717±0.41 2.227±0.74 5.221±0.51 2.078±0.56 6.319±0.51 1.111±0.15 4.955±1.75 1.787±0.63 2.402±1.14

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