C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001CD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018688-ENSDARG00000079470 CGP 7955 4:6747634-6837792
GeneTranscriptPositionBiotype
ENSDARG00000018688 (elk3)
ELK3, ETS-domain protein 		ENSDART00000009909 (elk3-201) 6769178-6783407 protein_coding
ENSDART00000149218 (elk3-001) 6747634-6783981 protein_coding
ENSDARG00000079470 (cdk16)
cyclin-dependent kinase 16 		ENSDART00000103070 (cdk16-202) 6789157-6837792 protein_coding
CIL_0001CD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111145-ENSG00000059758 CGP 9606 12:96194382-96400560
GeneTranscriptPositionBiotype
ENSG00000059758 (CDK17)
cyclin-dependent kinase 17 		ENST00000261211 (CDK17-001) 96278261-96400560 protein_coding
ENST00000542666 (CDK17-003) 96280544-96400074 protein_coding
ENST00000543119 (CDK17-002) 96280424-96400480 protein_coding
ENST00000548422 (CDK17-012) 96281739-96283633 retained_intron
ENST00000548734 (CDK17-007) 96313410-96335230 protein_coding
ENST00000549899 (CDK17-011) 96285730-96286750 retained_intron
ENST00000550971 (CDK17-010) 96283607-96295070 processed_transcript
ENST00000551484 (CDK17-009) 96286713-96295403 retained_intron
ENST00000551816 (CDK17-005) 96311058-96399404 protein_coding
ENST00000552262 (CDK17-006) 96323966-96399364 protein_coding
ENST00000552496 (CDK17-004) 96311112-96399404 protein_coding
ENST00000553042 (CDK17-008) 96289258-96303125 processed_transcript
ENSG00000111145 (ELK3)
ELK3, ETS-domain protein (SRF accessory protein 2) 		ENST00000228741 (ELK3-001) 96194382-96269835 protein_coding
ENST00000547249 (ELK3-003) 96194402-96223682 protein_coding
ENST00000547860 (ELK3-004) 96194614-96247211 protein_coding
ENST00000549529 (ELK3-006) 96255460-96267490 processed_transcript
ENST00000549985 (ELK3-005) 96247131-96267357 nonsense_mediated_decay
ENST00000552142 (ELK3-002) 96194545-96267830 protein_coding
ENSG00000201435 (RNU4-24P)
RNA, U4 small nuclear 24, pseudogene 		ENST00000364565 (RNU4-24P-201) 96303375-96303513 snRNA
ENSG00000257169 (RP11-117N2.2)
 ENST00000547580 (RP11-117N2.2-001) 96386818-96387194 processed_pseudogene
ENSG00000258177 (RP11-394J1.2)
 ENST00000551844 (RP11-394J1.2-001) 96222797-96223973 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CD_0001ENSDARG00000018688ENSDART00000009909ENSDART00000149218ENSDARG00000079470ENSDART00000103070CIL_0001CD_0002ENSG00000059758ENST00000261211ENST00000542666ENST00000543119ENST00000548422ENST00000548734ENST00000549899ENST00000550971ENST00000551484ENST00000551816ENST00000552262ENST00000552496ENST00000553042ENSG00000111145ENST00000228741ENST00000547249ENST00000547860ENST00000549529ENST00000549985ENST00000552142ENSG00000201435ENST00000364565ENSG00000257169ENST00000547580ENSG00000258177ENST00000551844
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CD_0001ENSDARG00000018688ENSDART00000009909ENSDART00000149218ENSDARG00000079470ENSDART00000103070CIL_0001CD_0002ENSG00000059758ENST00000261211ENST00000543119ENST00000551816ENST00000552496ENST00000553042ENSG00000111145ENST00000228741ENSG00000201435ENST00000364565ENSG00000257169ENST00000547580ENSG00000258177ENST00000551844
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018688 ENSDART00000009909 N/A N/A N/A 1.609±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149218 N/A N/A N/A 1.779±0.37 N/A N/A 3.266±0.40 2.012±0.00 0.282±0.00 N/A 1.936±0.00 N/A N/A N/A
ENSDARG00000079470 ENSDART00000103070 N/A N/A N/A 4.012±0.00 N/A N/A 1.606±1.15 0.911±0.00 0.775±0.00 N/A 0.378±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000059758 ENST00000261211 2.095±0.00 1.093±0.00 1.451±0.00 6.027±0.00 3.771±0.00 2.039±0.44 1.420±0.14 1.079±0.07 2.659±1.86 5.355±2.76 1.340±1.12 1.598±0.35 2.414±0.78 3.974±0.00
ENST00000542666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543119 N/A N/A N/A N/A N/A 2.441±0.00 1.156±0.00 N/A N/A 5.343±0.00 N/A 2.326±0.00 N/A N/A
ENST00000548422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551816 N/A N/A N/A N/A N/A N/A N/A N/A 9.205±0.00 N/A 2.650±0.00 N/A N/A N/A
ENST00000552262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.748±0.00 N/A N/A N/A
ENST00000553042 N/A N/A N/A N/A N/A N/A N/A 3.888±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000111145 ENST00000228741 16.999±0.00 22.156±0.00 N/A 1.068±0.54 7.995±4.49 4.459±3.89 3.634±2.66 2.474±0.72 3.017±0.87 10.224±5.80 2.043±0.00 4.764±1.80 6.917±1.57 6.009±2.60
ENST00000547249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201435 ENST00000364565 N/A N/A N/A 0.483±0.00 N/A 22.071±0.00 N/A N/A N/A 0.571±0.00 12.262±0.00 N/A N/A 0.213±0.00
ENSG00000257169 ENST00000547580 0.118±0.00 0.031±0.00 N/A 1.819±0.00 0.604±0.46 0.139±0.00 0.083±0.00 N/A N/A 1.129±0.00 N/A 0.636±0.81 N/A 0.101±0.00
ENSG00000258177 ENST00000551844 N/A N/A 5.860±0.00 3.037±0.00 N/A N/A N/A N/A N/A N/A N/A 23.520±0.00 29.976±0.00 25.441±0.00

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