C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ELK3, ETS-domain protein (SRF accessory protein 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547249 ELK3-003 ENSG00000111145 9606 + 12:96194402-96223682 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AH CIL_0006AH_0002 CGP 12:96000828-96269835
CIL_0001CD CIL_0001CD_0002 CGP 12:96194382-96400560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133365 Elk3-004 retained_intron Mus_musculus 0 399
ENSMUST00000008542 Elk3-001 protein_coding Mus_musculus 0 399
ENSMUST00000151153 Elk3-002 protein_coding Mus_musculus 0 220
ENSMUST00000129827 Elk3-005 nonsense_mediated_decay Mus_musculus 5e-38 161

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