C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001DR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101181-ENSG00000101180 CGP 9606 20:62183029-62220267
GeneTranscriptPositionBiotype
ENSG00000101180 (HRH3)
histamine receptor H3 		ENST00000317393 (HRH3-201) 62215379-62220267 protein_coding
ENST00000340177 (HRH3-001) 62214970-62220255 protein_coding
ENST00000611492 (HRH3-202) 62216332-62220267 protein_coding
ENSG00000101181 (MTG2)
mitochondrial ribosome-associated GTPase 2 		ENST00000370823 (MTG2-008) 62183045-62202767 protein_coding
ENST00000448254 (MTG2-001) 62183051-62199130 protein_coding
ENST00000461411 (MTG2-006) 62197215-62198853 processed_transcript
ENST00000466099 (MTG2-004) 62193598-62200204 processed_transcript
ENST00000466933 (MTG2-011) 62183029-62194053 processed_transcript
ENST00000467101 (MTG2-002) 62183044-62202767 nonsense_mediated_decay
ENST00000471352 (MTG2-003) 62183042-62198263 processed_transcript
ENST00000471962 (MTG2-007) 62198678-62200266 processed_transcript
ENST00000472005 (MTG2-005) 62193531-62200751 processed_transcript
ENST00000488748 (MTG2-010) 62202739-62203568 processed_transcript
CIL_0001DR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039069-ENSMUSG00000039059 CGP 10090 2:180070588-180104488
GeneTranscriptPositionBiotype
ENSMUSG00000039059 (Hrh3)
histamine receptor H3 		ENSMUST00000056480 (Hrh3-001) 180099465-180104488 protein_coding
ENSMUST00000163215 (Hrh3-008) 180099651-180104151 protein_coding
ENSMUST00000164442 (Hrh3-005) 180100496-180104151 protein_coding
ENSMUST00000165248 (Hrh3-007) 180099878-180104151 protein_coding
ENSMUST00000165762 (Hrh3-004) 180099878-180104151 protein_coding
ENSMUST00000166392 (Hrh3-002) 180100984-180103335 retained_intron
ENSMUST00000166724 (Hrh3-003) 180100279-180104174 nonsense_mediated_decay
ENSMUST00000171736 (Hrh3-006) 180100496-180104151 protein_coding
ENSMUSG00000039069 (Mtg2)
mitochondrial ribosome associated GTPase 2 		ENSMUST00000087563 (Mtg2-201) 180078623-180085902 protein_coding
ENSMUST00000108901 (Mtg2-003) 180071793-180085902 protein_coding
ENSMUST00000136803 (Mtg2-006) 180078620-180082890 retained_intron
ENSMUST00000142608 (Mtg2-004) 180070592-180080607 retained_intron
ENSMUST00000146182 (Mtg2-005) 180082989-180085900 retained_intron
ENSMUST00000147264 (Mtg2-002) 180070588-180085895 retained_intron
ENSMUST00000184862 (Mtg2-001) 180070592-180085902 nonsense_mediated_decay
ENSMUSG00000090589 (Gm17180)
predicted gene 17180 		ENSMUST00000172211 (Gm17180-001) 180099913-180101502 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DR_0001ENSG00000101180ENST00000317393ENST00000340177ENST00000611492ENSG00000101181ENST00000370823ENST00000448254ENST00000461411ENST00000466099ENST00000466933ENST00000467101ENST00000471352ENST00000471962ENST00000472005ENST00000488748CIL_0001DR_0002ENSMUSG00000039059ENSMUST00000056480ENSMUST00000163215ENSMUST00000164442ENSMUST00000165248ENSMUST00000165762ENSMUST00000166392ENSMUST00000166724ENSMUST00000171736ENSMUSG00000039069ENSMUST00000087563ENSMUST00000108901ENSMUST00000136803ENSMUST00000142608ENSMUST00000146182ENSMUST00000147264ENSMUST00000184862ENSMUSG00000090589ENSMUST00000172211
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DR_0001ENSG00000101180ENST00000317393ENST00000340177ENSG00000101181ENST00000370823ENST00000448254ENST00000461411ENST00000466099ENST00000467101ENST00000471352ENST00000471962ENST00000472005ENST00000488748CIL_0001DR_0002ENSMUSG00000039059ENSMUST00000056480ENSMUST00000163215ENSMUST00000164442ENSMUST00000165248ENSMUST00000166392ENSMUST00000166724ENSMUST00000171736ENSMUSG00000039069ENSMUST00000087563ENSMUST00000108901ENSMUST00000136803ENSMUST00000142608ENSMUST00000146182ENSMUST00000147264ENSMUST00000184862ENSMUSG00000090589ENSMUST00000172211
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101180 ENST00000317393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.540±0.00
ENST00000340177 N/A N/A N/A 1.987±1.43 N/A 0.042±0.00 N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.472±0.00
ENST00000611492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101181 ENST00000370823 2.179±0.00 4.932±0.00 N/A 2.569±2.22 2.075±1.24 0.707±0.00 1.700±1.22 3.332±0.00 3.088±2.80 0.800±0.45 1.005±0.58 6.069±4.25 4.892±1.97 7.447±1.77
ENST00000448254 6.238±0.00 9.004±0.00 2.631±0.00 1.757±0.00 4.740±0.00 1.640±0.00 2.237±0.00 5.666±0.00 0.971±0.00 1.465±0.00 N/A 4.018±0.00 5.631±0.00 N/A
ENST00000461411 N/A N/A N/A N/A N/A N/A N/A N/A 2.316±0.00 0.669±0.00 N/A N/A N/A N/A
ENST00000466099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.950±0.00 N/A N/A N/A
ENST00000466933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467101 N/A N/A N/A N/A N/A 1.135±0.00 N/A 2.703±0.00 N/A 1.364±0.00 N/A N/A N/A N/A
ENST00000471352 N/A N/A N/A N/A N/A N/A N/A N/A 1.650±0.00 N/A N/A N/A N/A N/A
ENST00000471962 N/A N/A N/A N/A 2.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472005 4.518±0.00 N/A N/A N/A N/A N/A N/A N/A 10.015±0.00 N/A N/A 2.660±0.00 N/A 13.636±0.00
ENST00000488748 N/A 6.225±0.00 N/A 4.816±2.94 4.378±0.00 4.275±0.00 4.455±0.00 9.693±0.00 N/A 4.958±0.00 1.650±0.00 12.997±2.46 7.291±0.00 10.585±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039059 ENSMUST00000056480 0.015±0.00 0.098±0.06 1.210±0.27 3.129±0.14 N/A 0.043±0.01 0.015±0.00 0.046±0.02 0.004±0.00 0.033±0.01 N/A 0.025±0.00 0.003±0.00 N/A
ENSMUST00000163215 N/A 0.078±0.05 N/A N/A N/A N/A N/A 0.021±0.00 0.009±0.00 N/A N/A N/A 0.044±0.00 N/A
ENSMUST00000164442 N/A N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165248 N/A N/A N/A N/A N/A 0.048±0.00 0.022±0.00 N/A N/A 0.023±0.00 N/A N/A N/A 0.468±0.00
ENSMUST00000165762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166392 N/A 0.177±0.02 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.124±0.02 0.009±0.00 N/A
ENSMUST00000166724 N/A 0.040±0.00 N/A N/A N/A 0.033±0.00 0.044±0.00 0.025±0.00 0.003±0.00 N/A 0.064±0.00 N/A 0.005±0.00 N/A
ENSMUST00000171736 N/A 0.190±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 0.089±0.02 0.011±0.00 N/A
ENSMUSG00000039069 ENSMUST00000087563 N/A N/A N/A 4.270±0.00 N/A N/A N/A N/A N/A N/A 2.987±1.44 5.112±0.95 3.415±0.90 0.620±0.17
ENSMUST00000108901 3.771±1.23 1.630±0.13 3.881±0.53 5.189±0.43 2.442±0.31 1.581±0.46 4.475±2.00 4.602±1.39 2.591±0.47 2.647±0.48 2.353±0.66 3.110±0.85 2.865±0.26 1.414±0.10
ENSMUST00000136803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.832±0.54 N/A N/A
ENSMUST00000142608 N/A N/A N/A N/A N/A N/A N/A N/A 0.766±0.00 N/A N/A N/A 1.866±0.31 N/A
ENSMUST00000146182 1.139±0.30 0.793±0.00 1.966±0.24 1.741±0.75 N/A 0.792±0.14 N/A N/A 0.750±0.24 N/A N/A 1.381±0.29 0.676±0.24 0.403±0.03
ENSMUST00000147264 2.425±1.19 1.631±0.70 1.795±0.18 2.029±0.61 1.733±0.32 1.229±0.43 1.532±0.33 1.309±0.06 0.749±0.14 1.865±0.50 N/A 2.521±0.77 0.836±0.02 0.588±0.05
ENSMUST00000184862 3.421±0.86 2.261±0.66 4.958±1.58 3.225±0.97 2.356±0.43 1.607±0.47 3.991±0.53 3.698±1.97 1.892±0.38 1.979±0.19 2.411±0.50 2.495±0.73 1.897±0.43 0.869±0.31
ENSMUSG00000090589 ENSMUST00000172211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.198±0.00 N/A

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