C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001DU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021402-ENSDARG00000061274 CGP 7955 9:39510115-39552700
GeneTranscriptPositionBiotype
ENSDARG00000021402 (mcm3ap)
MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
ENSDART00000008053 (mcm3ap-201) 39510580-39533789 protein_coding
ENSDART00000141954 (mcm3ap-002) 39522350-39523116 retained_intron
ENSDART00000142512 (mcm3ap-001) 39510115-39533790 protein_coding
ENSDARG00000061274 (lss)
lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
ENSDART00000087241 (lss-001) 39534089-39552700 protein_coding
CIL_0001DU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001150-ENSMUSG00000033105 CGP 10090 10:76468971-76557138
GeneTranscriptPositionBiotype
ENSMUSG00000001150 (Mcm3ap)
minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
ENSMUST00000170795 (Mcm3ap-201) 76468971-76515856 protein_coding
ENSMUSG00000033105 (Lss)
lanosterol synthase
ENSMUST00000048678 (Lss-001) 76531607-76555479 protein_coding
ENSMUST00000159013 (Lss-005) 76531588-76535568 processed_transcript
ENSMUST00000159172 (Lss-006) 76531682-76535723 retained_intron
ENSMUST00000160671 (Lss-002) 76531612-76557138 retained_intron
ENSMUST00000162282 (Lss-008) 76552271-76553233 retained_intron
ENSMUST00000162475 (Lss-003) 76531607-76548868 retained_intron
ENSMUST00000162848 (Lss-004) 76551210-76556618 retained_intron
ENSMUST00000163049 (Lss-007) 76541882-76542746 protein_coding
ENSMUSG00000033126 (Ybey)
ybeY metallopeptidase
ENSMUST00000049185 (Ybey-201) 76459569-76469114 protein_coding
ENSMUSG00000086241 (4930483K19Rik)
RIKEN cDNA 4930483K19 gene
ENSMUST00000127576 (4930483K19Rik-001) 76545871-76562226 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DU_0001ENSDARG00000021402ENSDART00000008053ENSDART00000141954ENSDART00000142512ENSDARG00000061274ENSDART00000087241CIL_0001DU_0002ENSMUSG00000001150ENSMUST00000170795ENSMUSG00000033105ENSMUST00000048678ENSMUST00000159013ENSMUST00000159172ENSMUST00000160671ENSMUST00000162282ENSMUST00000162475ENSMUST00000162848ENSMUST00000163049ENSMUSG00000033126ENSMUST00000049185ENSMUSG00000086241ENSMUST00000127576
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001DU_0001ENSDARG00000021402ENSDART00000008053ENSDART00000142512ENSDARG00000061274ENSDART00000087241CIL_0001DU_0002ENSMUSG00000001150ENSMUST00000170795ENSMUSG00000033105ENSMUST00000048678ENSMUST00000159013ENSMUST00000160671ENSMUST00000162475ENSMUST00000162848ENSMUSG00000033126ENSMUST00000049185ENSMUSG00000086241ENSMUST00000127576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021402 ENSDART00000008053 N/A N/A N/A 1.357±0.99 N/A N/A 1.716±1.04 0.939±0.15 N/A N/A 0.237±0.00 N/A N/A N/A
ENSDART00000141954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142512 N/A N/A N/A N/A N/A N/A N/A N/A 0.338±0.00 N/A N/A N/A N/A N/A
ENSDARG00000061274 ENSDART00000087241 N/A N/A N/A 1.223±0.98 N/A N/A 0.459±0.12 1.863±0.00 0.063±0.00 N/A 0.143±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001150 ENSMUST00000170795 6.181±1.01 4.795±0.79 7.336±1.04 8.159±3.91 5.372±0.25 3.900±0.91 2.737±0.84 3.736±0.49 4.134±1.38 6.252±1.08 3.685±0.68 8.284±3.39 8.041±3.98 3.945±0.54
ENSMUSG00000033105 ENSMUST00000048678 10.062±2.81 16.809±4.30 3.814±1.67 6.238±2.04 9.744±2.36 10.711±2.44 0.687±0.21 4.975±1.67 15.291±10.95 8.989±1.58 0.235±0.05 12.148±3.62 6.510±4.26 3.420±1.20
ENSMUST00000159013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.880±8.52 N/A
ENSMUST00000159172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160671 N/A N/A N/A 2.228±1.06 N/A N/A 0.135±0.00 N/A 2.903±0.00 N/A 0.174±0.09 N/A 2.705±0.47 N/A
ENSMUST00000162282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162475 N/A 4.147±0.55 N/A 2.599±0.00 N/A 2.091±0.00 0.250±0.00 N/A N/A 2.424±0.00 0.283±0.00 3.100±0.22 N/A N/A
ENSMUST00000162848 2.460±0.10 4.980±0.00 1.742±0.23 3.734±1.16 2.859±0.63 2.589±0.00 0.298±0.09 1.391±0.23 4.649±1.14 2.804±0.28 0.230±0.06 3.047±0.70 2.532±0.00 1.812±0.65
ENSMUST00000163049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033126 ENSMUST00000049185 N/A N/A N/A N/A 1.466±0.00 N/A 1.185±0.13 1.398±0.14 1.156±0.27 2.329±0.02 1.459±0.22 2.905±0.33 1.261±0.04 N/A
ENSMUSG00000086241 ENSMUST00000127576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.501±2.15

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