C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lanosterol synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048678 Lss-001 ENSMUSG00000033105 10090 + 10:76531607-76555479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048678
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048678 10.062±2.81 16.809±4.30 3.814±1.67 6.238±2.04 9.744±2.36 10.711±2.44 0.687±0.21 4.975±1.67 15.291±10.95 8.989±1.58 0.235±0.05 12.148±3.62 6.510±4.26 3.420±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DU CIL_0001DU_0002 CGP 10:76468971-76557138

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000250 IEA lanosterol synthase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005811 IEA lipid particle
GO:0006695 IEA cholesterol biosynthetic process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356396 LSS-002 protein_coding Homo_sapiens 0 2002
ENST00000397728 LSS-001 protein_coding Homo_sapiens 0 2002
ENST00000450351 LSS-005 protein_coding Homo_sapiens 0 713
ENST00000457828 LSS-201 protein_coding Homo_sapiens 0 1982
ENST00000464357 LSS-006 processed_transcript Homo_sapiens 0 826
ENST00000474319 LSS-003 retained_intron Homo_sapiens 0 191
ENST00000491729 LSS-004 retained_intron Homo_sapiens 0 191
ENST00000522411 LSS-010 protein_coding Homo_sapiens 0 1703

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