C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001EH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020600-ENSDARG00000004952 CGP 7955 17:35448767-35528452
GeneTranscriptPositionBiotype
ENSDARG00000004952 (rsad2)
radical S-adenosyl methionine domain containing 2 		ENSDART00000019617 (rsad2-001) 35524581-35528452 protein_coding
ENSDARG00000020600 (rnf144aa)
ring finger protein 144aa 		ENSDART00000016053 (rnf144aa-001) 35453006-35519820 protein_coding
ENSDART00000151937 (rnf144aa-201) 35448767-35484646 protein_coding
CIL_0001EH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020642-ENSMUSG00000020641 CGP 10090 12:26306797-26456452
GeneTranscriptPositionBiotype
ENSMUSG00000020641 (Rsad2)
radical S-adenosyl methionine domain containing 2 		ENSMUST00000020970 (Rsad2-001) 26442753-26456452 protein_coding
ENSMUST00000137792 (Rsad2-002) 26442753-26456431 nonsense_mediated_decay
ENSMUST00000142732 (Rsad2-003) 26450626-26454842 processed_transcript
ENSMUSG00000020642 (Rnf144a)
ring finger protein 144A 		ENSMUST00000020971 (Rnf144a-201) 26306797-26415256 protein_coding
ENSMUST00000062149 (Rnf144a-202) 26306797-26415256 protein_coding
ENSMUSG00000098771 (Mir6538)
microRNA 6538 		ENSMUST00000183713 (Mir6538-201) 26414901-26415010 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EH_0001ENSDARG00000004952ENSDART00000019617ENSDARG00000020600ENSDART00000016053ENSDART00000151937CIL_0001EH_0002ENSMUSG00000020641ENSMUST00000020970ENSMUST00000137792ENSMUST00000142732ENSMUSG00000020642ENSMUST00000020971ENSMUST00000062149ENSMUSG00000098771ENSMUST00000183713
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001EH_0001ENSDARG00000004952ENSDART00000019617ENSDARG00000020600ENSDART00000016053ENSDART00000151937CIL_0001EH_0002ENSMUSG00000020641ENSMUST00000020970ENSMUST00000137792ENSMUST00000142732ENSMUSG00000020642ENSMUST00000020971ENSMUST00000062149ENSMUSG00000098771ENSMUST00000183713
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004952 ENSDART00000019617 N/A N/A N/A 4.469±2.07 N/A N/A 11.762±11.51 3.094±2.58 N/A N/A 1.022±0.00 N/A N/A N/A
ENSDARG00000020600 ENSDART00000016053 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSDART00000151937 N/A N/A N/A 4.311±0.40 N/A N/A 2.165±0.93 0.892±0.52 0.062±0.00 N/A 0.450±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020641 ENSMUST00000020970 2.714±0.44 9.666±5.32 1.170±0.12 0.068±0.03 2.065±0.65 2.579±0.43 3.612±1.46 11.206±1.95 8.033±14.18 1.582±0.61 0.740±0.14 1.233±0.45 7.454±2.69 0.051±0.03
ENSMUST00000137792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.270±0.06 N/A N/A
ENSMUST00000142732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.03
ENSMUSG00000020642 ENSMUST00000020971 6.352±1.44 4.964±1.31 0.533±0.04 1.759±0.69 7.123±1.14 0.960±0.25 2.007±0.57 2.673±0.20 0.777±0.42 30.653±6.91 0.574±0.26 5.469±2.85 0.655±0.46 1.551±0.71
ENSMUST00000062149 6.088±1.54 5.420±1.06 0.777±0.00 6.461±3.74 7.851±2.72 1.220±0.38 2.071±0.55 2.387±0.76 0.618±0.21 21.605±2.18 0.577±0.09 7.748±1.83 1.070±0.62 1.779±1.06
ENSMUSG00000098771 ENSMUST00000183713 N/A N/A N/A N/A 2801.490±0.00 N/A N/A 1974.350±0.00 N/A 1846.580±769.83 N/A 2868.825±434.78 N/A 4422.490±1621.40

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