C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001NQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116016-ENSG00000187600 CGP 9606 2:46293667-46484425
GeneTranscriptPositionBiotype
ENSG00000116016 (EPAS1)
endothelial PAS domain protein 1 		ENST00000263734 (EPAS1-001) 46297402-46386703 protein_coding
ENST00000449347 (EPAS1-007) 46296608-46361090 protein_coding
ENST00000460015 (EPAS1-002) 46293667-46346998 processed_transcript
ENST00000463191 (EPAS1-005) 46356115-46361051 retained_intron
ENST00000465318 (EPAS1-006) 46381177-46382504 retained_intron
ENST00000466465 (EPAS1-010) 46379700-46386696 retained_intron
ENST00000467888 (EPAS1-004) 46297764-46347537 processed_transcript
ENST00000468530 (EPAS1-009) 46381635-46384550 processed_transcript
ENST00000475822 (EPAS1-003) 46335690-46356293 processed_transcript
ENST00000483692 (EPAS1-008) 46375636-46378702 retained_intron
ENSG00000228100 (AC016912.3)
 ENST00000418415 (AC016912.3-001) 46392297-46394167 lincRNA
ENSG00000241791 (RN7SL817P)
RNA, 7SL, cytoplasmic 817, pseudogene 		ENST00000480777 (RN7SL817P-201) 46448224-46448511 misc_RNA
CIL_0001NQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024140-ENSMUSG00000037689 CGP 10090 17:86753907-86922366
GeneTranscriptPositionBiotype
ENSMUSG00000024140 (Epas1)
endothelial PAS domain protein 1 		ENSMUST00000024954 (Epas1-201) 86753907-86833410 protein_coding
ENSMUSG00000037689 (Tmem247)
transmembrane protein 247 		ENSMUST00000042172 (Tmem247-201) 86917348-86922366 protein_coding
ENSMUSG00000099798 (RP24-107B10.3)
predicted gene 29168 		ENSMUST00000189953 (RP24-107B10.3-001) 86840030-86840716 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NQ_0001ENSG00000116016ENST00000263734ENST00000449347ENST00000460015ENST00000463191ENST00000465318ENST00000466465ENST00000467888ENST00000468530ENST00000475822ENST00000483692ENSG00000228100ENST00000418415ENSG00000241791ENST00000480777CIL_0001NQ_0002ENSMUSG00000024140ENSMUST00000024954ENSMUSG00000037689ENSMUST00000042172ENSMUSG00000099798ENSMUST00000189953
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NQ_0001ENSG00000116016ENST00000263734ENSG00000228100ENST00000418415ENSG00000241791ENST00000480777CIL_0001NQ_0002ENSMUSG00000024140ENSMUST00000024954ENSMUSG00000037689ENSMUST00000042172ENSMUSG00000099798ENSMUST00000189953
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116016 ENST00000263734 210.705±0.00 80.076±0.00 16.309±0.00 7.960±2.87 48.156±41.36 44.041±36.37 26.841±15.16 21.025±6.94 15.809±5.18 578.387±465.76 17.301±0.00 15.663±14.94 191.153±41.23 10.771±4.69
ENST00000449347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228100 ENST00000418415 0.030±0.00 0.062±0.00 N/A N/A N/A N/A 0.029±0.00 0.094±0.00 N/A N/A N/A N/A 1.276±0.60 2.005±0.30
ENSG00000241791 ENST00000480777 0.124±0.00 0.129±0.00 N/A 0.071±0.00 0.067±0.00 N/A N/A 0.533±0.00 N/A 0.064±0.00 N/A 0.517±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024140 ENSMUST00000024954 42.034±5.58 52.650±9.50 13.938±6.35 10.348±8.50 32.570±8.41 28.603±2.92 34.116±12.57 36.097±6.08 12.023±7.94 294.371±14.04 19.884±1.61 29.441±6.19 51.600±40.30 5.186±2.07
ENSMUSG00000037689 ENSMUST00000042172 N/A N/A N/A N/A 0.065±0.01 N/A 0.064±0.03 0.050±0.00 N/A 0.103±0.00 N/A 0.097±0.00 N/A 309.505±106.03
ENSMUSG00000099798 ENSMUST00000189953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A

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