C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001OQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079571-ENSDARG00000058801 CGP 7955 20:3378093-3441425
GeneTranscriptPositionBiotype
ENSDARG00000058801 (rev3l)
REV3-like, catalytic subunit of DNA polymerase zeta (yeast) 		ENSDART00000092264 (rev3l-201) 3385092-3441425 protein_coding
ENSDART00000136987 (rev3l-001) 3385087-3429251 protein_coding
ENSDARG00000079571 (zgc:162161)
zgc:162161 		ENSDART00000108955 (zgc:162161-001) 3378093-3384371 protein_coding
CIL_0001OQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173214-ENSG00000009413 CGP 9606 6:111259348-111483715
GeneTranscriptPositionBiotype
ENSG00000009413 (REV3L)
REV3-like, polymerase (DNA directed), zeta, catalytic subunit 		ENST00000358835 (REV3L-201) 111299052-111483715 protein_coding
ENST00000368802 (REV3L-009) 111299031-111483211 protein_coding
ENST00000368805 (REV3L-010) 111299031-111483229 protein_coding
ENST00000413831 (REV3L-003) 111343950-111367358 nonsense_mediated_decay
ENST00000422377 (REV3L-001) 111299031-111483715 nonsense_mediated_decay
ENST00000434009 (REV3L-008) 111299031-111482919 nonsense_mediated_decay
ENST00000435970 (REV3L-202) 111299052-111483715 protein_coding
ENST00000460981 (REV3L-012) 111392695-111405632 retained_intron
ENST00000462119 (REV3L-006) 111299028-111315637 processed_transcript
ENST00000467500 (REV3L-004) 111356668-111358901 retained_intron
ENST00000470871 (REV3L-002) 111387746-111390113 retained_intron
ENST00000492520 (REV3L-005) 111348953-111351733 retained_intron
ENST00000494858 (REV3L-011) 111405427-111411556 retained_intron
ENST00000619481 (REV3L-203) 111307731-111315422 protein_coding
ENSG00000173214 (KIAA1919)
KIAA1919 		ENST00000368847 (KIAA1919-001) 111259348-111271167 protein_coding
ENSG00000218676 (BRD7P4)
bromodomain containing 7 pseudogene 4 		ENST00000406170 (BRD7P4-001) 111430260-111431781 processed_pseudogene
ENSG00000220392 (FCF1P5)
FCF1 pseudogene 5 		ENST00000406490 (FCF1P5-001) 111353702-111354183 processed_pseudogene
ENSG00000229276 (REV3L-IT1)
REV3L intronic transcript 1 (non-protein coding) 		ENST00000411895 (REV3L-IT1-001) 111360641-111361607 sense_intronic
ENSG00000230177 (RP5-1112D6.4)
 ENST00000444259 (RP5-1112D6.4-001) 111277932-111278742 antisense
ENSG00000271789 (RP5-1112D6.7)
 ENST00000607386 (RP5-1112D6.7-001) 111297126-111298510 lincRNA
ENSG00000272356 (RP5-1112D6.8)
 ENST00000607434 (RP5-1112D6.8-001) 111309203-111313517 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OQ_0001ENSDARG00000058801ENSDART00000092264ENSDART00000136987ENSDARG00000079571ENSDART00000108955CIL_0001OQ_0002ENSG00000009413ENST00000358835ENST00000368802ENST00000368805ENST00000413831ENST00000422377ENST00000434009ENST00000435970ENST00000460981ENST00000462119ENST00000467500ENST00000470871ENST00000492520ENST00000494858ENST00000619481ENSG00000173214ENST00000368847ENSG00000218676ENST00000406170ENSG00000220392ENST00000406490ENSG00000229276ENST00000411895ENSG00000230177ENST00000444259ENSG00000271789ENST00000607386ENSG00000272356ENST00000607434
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001OQ_0001ENSDARG00000058801ENSDART00000092264ENSDART00000136987ENSDARG00000079571ENSDART00000108955CIL_0001OQ_0002ENSG00000009413ENST00000358835ENST00000368802ENST00000368805ENST00000422377ENST00000434009ENST00000435970ENST00000462119ENSG00000173214ENST00000368847ENSG00000218676ENST00000406170ENSG00000220392ENST00000406490ENSG00000229276ENST00000411895ENSG00000230177ENST00000444259ENSG00000271789ENST00000607386ENSG00000272356ENST00000607434
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058801 ENSDART00000092264 N/A N/A N/A 4.806±1.13 N/A N/A 1.524±0.00 2.319±0.00 0.162±0.00 N/A 0.603±0.00 N/A N/A N/A
ENSDART00000136987 N/A N/A N/A 3.477±1.65 N/A N/A 1.486±1.71 0.747±0.22 0.308±0.00 N/A 0.215±0.00 N/A N/A N/A
ENSDARG00000079571 ENSDART00000108955 N/A N/A N/A 3.567±1.18 N/A N/A 4.712±1.89 1.916±2.40 1.521±0.00 N/A 2.181±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009413 ENST00000358835 N/A N/A N/A N/A N/A N/A 0.569±0.00 N/A N/A N/A N/A 0.931±0.00 N/A N/A
ENST00000368802 8.272±0.00 N/A N/A 1.113±0.00 1.934±0.00 N/A 0.844±0.00 1.628±0.00 2.375±0.00 1.915±0.02 0.629±0.00 0.710±0.00 N/A 1.670±0.00
ENST00000368805 N/A 1.243±0.00 N/A 1.336±0.00 1.520±0.00 2.331±0.00 0.289±0.00 N/A 0.393±0.00 N/A 1.549±0.60 1.568±0.00 1.034±0.40 1.730±0.30
ENST00000413831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422377 N/A N/A 0.954±0.00 N/A N/A 2.599±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434009 N/A N/A N/A N/A N/A N/A N/A 2.025±0.00 N/A N/A N/A N/A N/A N/A
ENST00000435970 N/A N/A N/A N/A N/A N/A 0.376±0.00 N/A 0.237±0.00 N/A N/A 0.565±0.00 0.247±0.00 0.894±0.00
ENST00000460981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462119 N/A 3.063±0.00 N/A 1.853±0.00 N/A N/A N/A N/A 1.366±0.00 N/A N/A 2.090±0.22 1.208±0.42 2.985±0.00
ENST00000467500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173214 ENST00000368847 0.780±0.00 2.080±0.00 4.544±0.00 0.690±0.14 1.521±0.45 0.998±0.25 0.551±0.05 1.870±0.68 1.214±0.46 0.796±0.35 0.485±0.02 1.747±0.93 1.744±0.68 2.239±0.55
ENSG00000218676 ENST00000406170 0.125±0.00 0.016±0.00 0.108±0.00 0.023±0.01 0.125±0.05 0.102±0.06 0.036±0.01 0.020±0.00 0.671±0.00 N/A N/A 0.130±0.08 0.011±0.00 0.071±0.02
ENSG00000220392 ENST00000406490 0.179±0.00 0.481±0.00 3.752±0.00 0.026±0.00 0.841±0.69 0.981±0.00 0.469±0.45 N/A 2.865±0.00 2.495±0.00 1.500±0.00 0.494±0.49 0.083±0.00 0.274±0.16
ENSG00000229276 ENST00000411895 0.191±0.00 0.868±0.00 N/A 0.515±0.00 0.314±0.00 0.266±0.00 0.045±0.00 0.647±0.00 0.079±0.00 0.089±0.00 0.064±0.00 0.398±0.23 0.989±0.00 0.446±0.00
ENSG00000230177 ENST00000444259 0.950±0.00 1.048±0.00 4.233±0.00 0.646±0.00 0.847±0.00 0.315±0.00 0.389±0.20 1.322±0.57 0.805±0.00 0.686±0.35 1.244±0.00 1.140±0.00 0.725±0.00 0.916±0.21
ENSG00000271789 ENST00000607386 0.163±0.00 0.422±0.00 2.977±0.00 0.087±0.00 0.400±0.19 0.496±0.19 0.315±0.21 0.948±0.45 0.501±0.36 0.401±0.33 0.085±0.00 0.443±0.17 0.176±0.11 0.203±0.11
ENSG00000272356 ENST00000607434 N/A 1.957±0.00 2.660±0.00 1.220±0.00 2.092±0.00 1.954±0.00 N/A 2.191±0.00 N/A N/A N/A 1.290±0.06 1.704±0.00 1.737±0.00

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