C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001PJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173890-ENSG00000173889 CGP 9606 3:170037929-170181749
GeneTranscriptPositionBiotype
ENSG00000173890 (GPR160)
G protein-coupled receptor 160 		ENST00000355897 (GPR160-001) 170037929-170085403 protein_coding
ENST00000473675 (GPR160-011) 170079772-170084403 protein_coding
ENST00000476668 (GPR160-008) 170057841-170063268 processed_transcript
ENST00000478364 (GPR160-005) 170038786-170077341 processed_transcript
ENST00000482710 (GPR160-009) 170077134-170084237 protein_coding
ENST00000482813 (GPR160-006) 170038199-170063151 processed_transcript
ENST00000485735 (GPR160-007) 170049855-170084461 protein_coding
ENST00000491740 (GPR160-004) 170038204-170077276 processed_transcript
ENST00000492492 (GPR160-002) 170038138-170084071 protein_coding
ENST00000492924 (GPR160-010) 170077220-170077971 processed_transcript
ENSG00000201342 (RNU4-38P)
RNA, U4 small nuclear 38, pseudogene 		ENST00000364472 (RNU4-38P-201) 170057301-170057429 snRNA
ENSG00000268220 (RP11-379K17.12)
 ENST00000599781 (RP11-379K17.12-001) 170087810-170089590 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0001PJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037661-ENSMUSG00000037652 CGP 10090 3:30855950-30969415
GeneTranscriptPositionBiotype
ENSMUSG00000037652 (Phc3)
polyhomeotic-like 3 (Drosophila) 		ENSMUST00000046624 (Phc3-004) 30907062-30969405 nonsense_mediated_decay
ENSMUST00000064718 (Phc3-201) 30899295-30969415 protein_coding
ENSMUST00000099163 (Phc3-003) 30929296-30969415 protein_coding
ENSMUST00000108255 (Phc3-002) 30906784-30969405 protein_coding
ENSMUST00000124472 (Phc3-006) 30921023-30933111 retained_intron
ENSMUST00000129817 (Phc3-202) 30907311-30969399 protein_coding
ENSMUST00000150939 (Phc3-007) 30961103-30965935 retained_intron
ENSMUST00000152357 (Phc3-005) 30906985-30969405 nonsense_mediated_decay
ENSMUST00000165166 (Phc3-008) 30899524-30914290 processed_transcript
ENSMUST00000168645 (Phc3-001) 30899371-30969401 protein_coding
ENSMUST00000177992 (Phc3-203) 30907311-30969399 protein_coding
ENSMUSG00000037661 (Gpr160)
G protein-coupled receptor 160 		ENSMUST00000046748 (Gpr160-005) 30855989-30897190 protein_coding
ENSMUST00000108258 (Gpr160-003) 30856015-30897190 protein_coding
ENSMUST00000108259 (Gpr160-004) 30855950-30897190 protein_coding
ENSMUST00000108261 (Gpr160-001) 30855950-30897190 protein_coding
ENSMUST00000130294 (Gpr160-002) 30855950-30879461 retained_intron
ENSMUST00000147697 (Gpr160-006) 30856143-30895821 protein_coding
ENSMUST00000166278 (Gpr160-201) 30855950-30897192 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PJ_0001ENSG00000173890ENST00000355897ENST00000473675ENST00000476668ENST00000478364ENST00000482710ENST00000482813ENST00000485735ENST00000491740ENST00000492492ENST00000492924ENSG00000201342ENST00000364472ENSG00000268220ENST00000599781CIL_0001PJ_0002ENSMUSG00000037652ENSMUST00000046624ENSMUST00000064718ENSMUST00000099163ENSMUST00000108255ENSMUST00000124472ENSMUST00000129817ENSMUST00000150939ENSMUST00000152357ENSMUST00000165166ENSMUST00000168645ENSMUST00000177992ENSMUSG00000037661ENSMUST00000046748ENSMUST00000108258ENSMUST00000108259ENSMUST00000108261ENSMUST00000130294ENSMUST00000147697ENSMUST00000166278
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001PJ_0001ENSG00000173890ENST00000355897ENST00000482710ENST00000482813ENST00000485735ENST00000492492ENSG00000201342ENST00000364472ENSG00000268220ENST00000599781CIL_0001PJ_0002ENSMUSG00000037652ENSMUST00000046624ENSMUST00000064718ENSMUST00000099163ENSMUST00000129817ENSMUST00000168645ENSMUSG00000037661ENSMUST00000046748ENSMUST00000108258ENSMUST00000108259ENSMUST00000108261ENSMUST00000130294ENSMUST00000147697ENSMUST00000166278
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173890 ENST00000355897 5.991±0.00 1.637±0.00 3.280±0.00 0.213±0.13 2.545±1.11 5.233±0.67 0.346±0.29 7.323±0.00 0.505±0.06 2.145±1.19 0.167±0.00 2.593±1.42 1.148±0.44 2.895±0.00
ENST00000473675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482710 N/A N/A 2.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.531±0.00 0.198±0.00 0.663±0.00
ENST00000485735 N/A N/A N/A 0.274±0.06 N/A N/A 0.568±0.00 0.271±0.00 N/A 5.990±0.00 0.334±0.00 3.685±0.68 0.289±0.00 N/A
ENST00000491740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492492 N/A N/A N/A 0.123±0.00 N/A N/A N/A N/A 0.301±0.00 N/A N/A N/A 0.120±0.00 2.578±0.00
ENST00000492924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201342 ENST00000364472 N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000268220 ENST00000599781 7.248±0.00 N/A N/A 7.949±0.00 6.350±0.00 N/A 4.315±0.00 8.482±0.00 2.144±0.00 6.878±0.00 0.927±0.00 6.277±1.92 2.408±0.46 4.547±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037652 ENSMUST00000046624 N/A 2.643±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000064718 1.726±0.00 1.453±0.00 4.445±0.22 2.521±0.48 5.152±0.00 1.850±0.71 N/A N/A 0.607±0.28 2.860±0.00 0.811±0.35 3.294±1.69 1.176±0.36 N/A
ENSMUST00000099163 N/A N/A N/A N/A 8.399±0.00 4.374±1.09 N/A N/A 1.010±0.00 5.255±0.00 N/A 4.346±0.00 N/A 1.392±0.02
ENSMUST00000108255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129817 4.212±0.00 5.072±2.54 N/A N/A 7.439±1.23 5.224±1.59 1.715±0.22 N/A 1.720±0.30 9.047±0.00 N/A 9.915±3.13 N/A 1.845±0.53
ENSMUST00000150939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168645 0.808±0.00 5.007±0.83 4.457±0.11 3.558±0.18 2.369±0.18 2.776±0.60 N/A N/A 1.346±0.95 5.911±0.00 0.901±0.36 4.037±1.71 1.795±0.43 N/A
ENSMUST00000177992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037661 ENSMUST00000046748 2.907±1.52 N/A 1.865±0.64 0.165±0.00 1.410±0.12 5.079±0.00 0.484±0.08 3.706±0.92 0.534±0.26 0.704±0.08 0.132±0.04 0.636±0.12 0.581±0.38 22.696±7.55
ENSMUST00000108258 3.668±0.00 0.650±0.22 N/A 0.081±0.00 1.290±0.09 4.885±2.60 0.337±0.02 1.891±0.20 0.254±0.18 0.595±0.11 N/A 0.851±0.34 0.382±0.17 N/A
ENSMUST00000108259 0.901±0.12 N/A N/A N/A N/A N/A N/A N/A 0.295±0.09 0.531±0.00 N/A 0.657±0.00 0.214±0.00 N/A
ENSMUST00000108261 N/A 0.694±0.18 N/A N/A 1.006±0.08 N/A N/A 2.163±0.20 N/A N/A 0.363±0.00 0.993±0.70 N/A N/A
ENSMUST00000130294 N/A 0.354±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 0.087±0.00 N/A N/A
ENSMUST00000147697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A 16.429±0.00
ENSMUST00000166278 8.655±0.87 1.134±0.46 N/A 0.301±0.00 4.615±1.48 5.248±1.57 0.405±0.05 8.794±2.17 0.423±0.28 2.385±0.58 0.048±0.01 1.511±0.78 0.512±0.00 45.105±20.69

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