C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin alpha E, epithelial-associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006101 Itgae-001 ENSMUSG00000005947 10090 + 11:73090583-73147446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000006101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006101 0.652±0.08 0.235±0.10 0.164±0.03 0.049±0.00 3.122±1.96 0.878±0.25 0.106±0.04 0.308±0.13 0.081±0.05 1.549±0.52 0.082±0.07 0.398±0.21 0.025±0.02 5.987±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Q0 CIL_0001Q0_0002 CGP 11:73090583-73147446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0009897 IDA external side of plasma membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263087 ITGAE-001 protein_coding Homo_sapiens 0 2196
ENST00000570360 ITGAE-004 processed_transcript Homo_sapiens 0 394
ENST00000570415 ITGAE-009 retained_intron Homo_sapiens 0 538
ENST00000571937 ITGAE-003 retained_intron Homo_sapiens 3.00004e-41 174
ENST00000572179 ITGAE-002 processed_transcript Homo_sapiens 0 315
ENST00000572433 ITGAE-007 retained_intron Homo_sapiens 0 313

Loading