C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001RK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052247-ENSDARG00000035147 CGP 7955 5:64530237-64567493
GeneTranscriptPositionBiotype
ENSDARG00000035147 (lrwd1)
leucine-rich repeats and WD repeat domain containing 1 		ENSDART00000050906 (lrwd1-001) 64538633-64567493 protein_coding
ENSDART00000127521 (lrwd1-002) 64537965-64550214 processed_transcript
ENSDARG00000052247 (alkbh4)
alkB, alkylation repair homolog 4 (E. coli) 		ENSDART00000074073 (alkbh4-001) 64530237-64535385 protein_coding
CIL_0001RK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160993-ENSG00000161036 CGP 9606 7:102456238-102473168
GeneTranscriptPositionBiotype
ENSG00000005075 (POLR2J)
polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa 		ENST00000292614 (POLR2J-001) 102473118-102478907 protein_coding
ENST00000393794 (POLR2J-201) 102473938-102478906 protein_coding
ENSG00000160991 (ORAI2)
ORAI calcium release-activated calcium modulator 2 		ENST00000356387 (ORAI2-201) 102433530-102456821 protein_coding
ENST00000403646 (ORAI2-002) 102433576-102448716 protein_coding
ENST00000468241 (ORAI2-008) 102433576-102446924 protein_coding
ENST00000473939 (ORAI2-003) 102436299-102448732 protein_coding
ENST00000478730 (ORAI2-001) 102433570-102451609 protein_coding
ENST00000482237 (ORAI2-006) 102433106-102439047 protein_coding
ENST00000488996 (ORAI2-007) 102433549-102447048 processed_transcript
ENST00000495936 (ORAI2-004) 102433535-102446975 protein_coding
ENST00000498661 (ORAI2-005) 102436160-102446579 protein_coding
ENST00000611770 (ORAI2-202) 102433530-102456821 protein_coding
ENSG00000160993 (ALKBH4)
alkB, alkylation repair homolog 4 (E. coli) 		ENST00000292566 (ALKBH4-001) 102456238-102464876 protein_coding
ENST00000490528 (ALKBH4-002) 102456834-102464863 nonsense_mediated_decay
ENST00000498283 (ALKBH4-003) 102459397-102464857 retained_intron
ENSG00000161036 (LRWD1)
leucine-rich repeats and WD repeat domain containing 1 		ENST00000292616 (LRWD1-001) 102464929-102473168 protein_coding
ENST00000463739 (LRWD1-004) 102464956-102468377 protein_coding
ENST00000464107 (LRWD1-003) 102465001-102467376 nonsense_mediated_decay
ENST00000468175 (LRWD1-009) 102469589-102473168 protein_coding
ENST00000473880 (LRWD1-002) 102465023-102473166 retained_intron
ENST00000476270 (LRWD1-005) 102465095-102466270 nonsense_mediated_decay
ENST00000485417 (LRWD1-006) 102467342-102468445 retained_intron
ENST00000485808 (LRWD1-007) 102465152-102468559 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RK_0001ENSDARG00000035147ENSDART00000050906ENSDART00000127521ENSDARG00000052247ENSDART00000074073CIL_0001RK_0002ENSG00000005075ENST00000292614ENST00000393794ENSG00000160991ENST00000356387ENST00000403646ENST00000468241ENST00000473939ENST00000478730ENST00000482237ENST00000488996ENST00000495936ENST00000498661ENST00000611770ENSG00000160993ENST00000292566ENST00000490528ENST00000498283ENSG00000161036ENST00000292616ENST00000463739ENST00000464107ENST00000468175ENST00000473880ENST00000476270ENST00000485417ENST00000485808
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001RK_0001ENSDARG00000035147ENSDART00000050906ENSDART00000127521ENSDARG00000052247ENSDART00000074073CIL_0001RK_0002ENSG00000005075ENST00000292614ENST00000393794ENSG00000160991ENST00000356387ENST00000403646ENST00000473939ENST00000478730ENST00000488996ENST00000495936ENST00000611770ENSG00000160993ENST00000292566ENST00000490528ENST00000498283ENSG00000161036ENST00000292616ENST00000468175ENST00000473880
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035147 ENSDART00000050906 N/A N/A N/A 0.083±0.03 N/A N/A 0.383±0.22 0.684±0.27 0.211±0.00 N/A 0.354±0.00 N/A N/A N/A
ENSDART00000127521 N/A N/A N/A 0.690±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000052247 ENSDART00000074073 N/A N/A N/A 2.590±1.67 N/A N/A 2.428±0.15 2.496±1.88 0.571±0.00 N/A 2.118±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005075 ENST00000292614 5.842±0.00 13.870±0.00 0.866±0.00 7.721±1.74 4.612±3.10 5.080±2.60 7.331±3.76 8.384±3.20 7.513±3.28 6.675±4.12 17.229±8.56 14.122±9.32 14.491±7.71 N/A
ENST00000393794 N/A N/A N/A N/A N/A 1.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000160991 ENST00000356387 N/A N/A N/A N/A N/A N/A 0.206±0.00 N/A 0.120±0.00 N/A N/A N/A N/A N/A
ENST00000403646 N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A
ENST00000468241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473939 N/A N/A N/A 1.146±0.00 0.504±0.00 0.206±0.00 N/A N/A N/A N/A N/A 3.623±1.16 2.838±0.65 N/A
ENST00000478730 9.268±0.00 12.671±0.00 0.081±0.00 2.947±2.39 1.996±0.00 0.952±0.81 0.335±0.31 2.921±2.79 0.338±0.17 3.341±3.25 0.093±0.08 3.622±2.21 2.840±0.49 0.925±0.47
ENST00000482237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488996 N/A N/A N/A N/A 1.529±0.00 0.794±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495936 N/A N/A N/A N/A N/A N/A N/A N/A 1.493±0.00 N/A N/A 2.110±0.00 N/A N/A
ENST00000498661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611770 N/A N/A N/A N/A 0.568±0.00 N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A 0.514±0.00
ENSG00000160993 ENST00000292566 N/A 5.557±0.00 0.249±0.00 2.569±1.61 2.604±0.00 1.258±1.04 0.549±0.48 2.376±1.97 1.540±0.00 N/A 0.521±0.36 4.586±1.11 3.089±0.31 2.225±0.71
ENST00000490528 N/A N/A N/A 1.614±0.00 0.581±0.00 N/A 0.698±0.38 N/A 0.998±0.00 0.628±0.00 2.502±0.00 5.506±4.05 4.418±0.61 2.696±0.27
ENST00000498283 N/A N/A N/A N/A N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A N/A 6.054±0.00
ENSG00000161036 ENST00000292616 3.755±0.00 9.003±0.00 0.830±0.00 3.909±2.85 2.228±1.80 4.259±0.00 2.501±0.00 7.372±0.00 6.449±0.00 3.437±3.07 4.160±2.72 11.957±6.25 7.020±2.61 274.346±48.24
ENST00000463739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468175 N/A N/A 1.116±0.00 N/A N/A N/A N/A 2.150±0.00 N/A N/A N/A 14.167±0.00 3.280±0.00 243.973±0.00
ENST00000473880 N/A 1.020±0.00 N/A N/A 0.402±0.00 N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A N/A
ENST00000476270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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