C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkB, alkylation repair homolog 4 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490528 ALKBH4-002 ENSG00000160993 9606 - 7:102456834-102464863 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000490528
Transcript ID Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000490528 1.614±0.00 0.581±0.00 0.698±0.38 0.998±0.00 0.628±0.00 2.502±0.00 5.506±4.05 4.418±0.61 2.696±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RK CIL_0001RK_0002 CGP 7:102456238-102473168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006482 IDA protein demethylation
GO:0016706 IDA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0030496 IDA midbody
GO:0031032 IMP actomyosin structure organization
GO:0032451 TAS demethylase activity
GO:0036090 IMP cleavage furrow ingression
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process
GO:0070938 IDA contractile ring

Homologs

No Homologs available.

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