C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001SM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015314-ENSDARG00000062463 CGP 7955 5:23857038-23889951
GeneTranscriptPositionBiotype
ENSDARG00000015314 (zc4h2)
zinc finger, C4H2 domain containing 		ENSDART00000020908 (zc4h2-001) 23857038-23866246 protein_coding
ENSDART00000147484 (zc4h2-002) 23864923-23866135 retained_intron
ENSDARG00000062463 (zc3h12b)
zinc finger CCCH-type containing 12B 		ENSDART00000090375 (zc3h12b-201) 23882005-23889951 protein_coding
ENSDART00000143676 (zc3h12b-001) 23881919-23889922 protein_coding
ENSDARG00000094151 (si:dkey-286f3.5)
si:dkey-286f3.5 		ENSDART00000147575 (si:dkey-286f3.5-001) 23870984-23880236 processed_transcript
CIL_0001SM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126970-ENSG00000102053 CGP 9606 X:64915802-65507887
GeneTranscriptPositionBiotype
ENSG00000102053 (ZC3H12B)
zinc finger CCCH-type containing 12B 		ENST00000338957 (ZC3H12B-002) 65488735-65507887 protein_coding
ENST00000617377 (ZC3H12B-003) 65366638-65499310 retained_intron
ENSG00000126970 (ZC4H2)
zinc finger, C4H2 domain containing 		ENST00000337990 (ZC4H2-002) 64916382-65034713 protein_coding
ENST00000374839 (ZC4H2-001) 64916381-64976484 protein_coding
ENST00000447788 (ZC4H2-201) 64915802-64976533 protein_coding
ENST00000476032 (ZC4H2-006) 64917858-64976363 processed_transcript
ENST00000488406 (ZC4H2-007) 64917400-64920127 processed_transcript
ENST00000488608 (ZC4H2-003) 64916488-64976533 processed_transcript
ENST00000488831 (ZC4H2-005) 64917840-65034669 processed_transcript
ENST00000492653 (ZC4H2-004) 64917780-64976473 processed_transcript
ENSG00000225569 (CCT4P2)
chaperonin containing TCP1, subunit 4 (delta) pseudogene 2 		ENST00000233836 (CCT4P2-001) 65270913-65273019 processed_pseudogene
ENSG00000227534 (RP3-323B6.1)
 ENST00000433173 (RP3-323B6.1-001) 65469087-65470380 processed_pseudogene
ENSG00000228158 (TLE1P1)
transducin-like enhancer of split 1 pseudogene 1 		ENST00000422965 (TLE1P1-001) 65408084-65408672 processed_pseudogene
ENSG00000231857 (MORF4L1P5)
mortality factor 4 like 1 pseudogene 5 		ENST00000433352 (MORF4L1P5-001) 65327988-65331233 processed_pseudogene
ENSG00000237963 (RP11-151G12.2)
 ENST00000454528 (RP11-151G12.2-001) 65356890-65357547 processed_pseudogene
ENSG00000237971 (RP11-231N9.1)
 ENST00000451184 (RP11-231N9.1-001) 65185018-65187265 processed_pseudogene
CIL_0001SM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035062-ENSMUSG00000035045 CGP 10090 X:95639193-95932637
GeneTranscriptPositionBiotype
ENSMUSG00000035045 (Zc3h12b)
zinc finger CCCH-type containing 12B 		ENSMUST00000082183 (Zc3h12b-004) 95899033-95928230 protein_coding
ENSMUST00000127461 (Zc3h12b-003) 95922390-95927097 protein_coding
ENSMUST00000145362 (Zc3h12b-002) 95899120-95932637 nonsense_mediated_decay
ENSMUST00000150123 (Zc3h12b-001) 95711678-95924758 processed_transcript
ENSMUSG00000035062 (Zc4h2)
zinc finger, C4H2 domain containing 		ENSMUST00000044382 (Zc4h2-001) 95639199-95658509 protein_coding
ENSMUST00000119640 (Zc4h2-003) 95639196-95658383 protein_coding
ENSMUST00000120620 (Zc4h2-002) 95639193-95658408 protein_coding
ENSMUSG00000071721 (1700010D01Rik)
RIKEN cDNA 1700010D01 gene 		ENSMUST00000096366 (1700010D01Rik-001) 95732586-95733265 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SM_0001ENSDARG00000015314ENSDART00000020908ENSDART00000147484ENSDARG00000062463ENSDART00000090375ENSDART00000143676ENSDARG00000094151ENSDART00000147575CIL_0001SM_0002ENSG00000102053ENST00000338957ENST00000617377ENSG00000126970ENST00000337990ENST00000374839ENST00000447788ENST00000476032ENST00000488406ENST00000488608ENST00000488831ENST00000492653ENSG00000225569ENST00000233836ENSG00000227534ENST00000433173ENSG00000228158ENST00000422965ENSG00000231857ENST00000433352ENSG00000237963ENST00000454528ENSG00000237971ENST00000451184CIL_0001SM_0003ENSMUSG00000035045ENSMUST00000082183ENSMUST00000127461ENSMUST00000145362ENSMUST00000150123ENSMUSG00000035062ENSMUST00000044382ENSMUST00000119640ENSMUST00000120620ENSMUSG00000071721ENSMUST00000096366
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001SM_0001ENSDARG00000015314ENSDART00000020908ENSDARG00000062463ENSDART00000090375ENSDART00000143676ENSDARG00000094151ENSDART00000147575CIL_0001SM_0002ENSG00000102053ENST00000338957ENST00000617377ENSG00000126970ENST00000337990ENST00000374839ENST00000447788ENST00000476032ENST00000488406ENST00000488608ENST00000488831ENST00000492653ENSG00000225569ENST00000233836ENSG00000227534ENST00000433173ENSG00000228158ENST00000422965ENSG00000231857ENST00000433352ENSG00000237963ENST00000454528ENSG00000237971ENST00000451184CIL_0001SM_0003ENSMUSG00000035045ENSMUST00000082183ENSMUST00000127461ENSMUST00000145362ENSMUST00000150123ENSMUSG00000035062ENSMUST00000044382ENSMUST00000119640ENSMUST00000120620ENSMUSG00000071721ENSMUST00000096366
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015314 ENSDART00000020908 N/A N/A N/A 36.572±4.82 N/A N/A 5.087±2.93 13.032±5.62 0.197±0.00 N/A 1.433±0.00 N/A N/A N/A
ENSDART00000147484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062463 ENSDART00000090375 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A 0.304±0.00 N/A N/A N/A
ENSDART00000143676 N/A N/A N/A 3.101±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094151 ENSDART00000147575 N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102053 ENST00000338957 N/A N/A N/A 0.467±0.18 0.166±0.00 N/A 0.039±0.02 0.104±0.00 0.027±0.00 0.201±0.15 0.041±0.02 0.183±0.16 0.023±0.01 0.205±0.00
ENST00000617377 N/A 0.350±0.00 0.219±0.00 1.272±0.00 N/A 0.786±0.00 N/A N/A 1.142±0.00 0.135±0.00 N/A 0.509±0.00 0.013±0.00 N/A
ENSG00000126970 ENST00000337990 0.233±0.00 0.783±0.00 N/A 0.537±0.00 N/A N/A 0.437±0.00 1.482±0.00 0.298±0.00 0.445±0.00 N/A 0.966±0.67 0.480±0.12 N/A
ENST00000374839 1.258±0.00 2.270±0.00 N/A 1.903±0.48 2.042±0.00 2.037±1.74 0.477±0.00 1.334±0.12 1.180±0.35 0.629±0.45 0.209±0.00 2.277±1.73 0.220±0.00 1.250±1.14
ENST00000447788 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A 0.133±0.00 N/A N/A
ENST00000476032 N/A N/A 1.029±0.00 N/A 1.062±0.00 1.310±0.00 0.211±0.00 1.107±0.00 N/A N/A N/A N/A 0.139±0.00 0.334±0.00
ENST00000488406 N/A N/A N/A N/A N/A N/A 0.592±0.00 N/A N/A N/A 0.738±0.00 N/A N/A N/A
ENST00000488608 N/A N/A N/A 0.305±0.00 0.139±0.00 0.167±0.00 N/A N/A N/A 0.176±0.00 N/A N/A N/A 0.051±0.00
ENST00000488831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.909±0.00 0.428±0.00 0.250±0.00 0.339±0.00
ENST00000492653 N/A N/A N/A N/A 0.374±0.00 1.130±0.00 0.255±0.00 0.564±0.00 N/A N/A N/A 1.132±0.00 0.095±0.00 N/A
ENSG00000225569 ENST00000233836 0.006±0.00 0.029±0.00 0.129±0.00 0.042±0.02 0.430±0.00 0.217±0.17 0.036±0.02 0.039±0.00 0.220±0.00 0.328±0.00 N/A 0.044±0.03 0.014±0.00 0.022±0.01
ENSG00000227534 ENST00000433173 N/A 0.123±0.00 N/A N/A N/A N/A N/A 0.488±0.00 N/A 0.017±0.00 N/A N/A N/A 0.113±0.00
ENSG00000228158 ENST00000422965 0.451±0.00 0.563±0.00 N/A 0.567±0.00 0.612±0.44 0.456±0.30 0.451±0.00 0.366±0.00 0.603±0.00 0.421±0.00 1.231±0.00 0.051±0.01 N/A 0.627±0.18
ENSG00000231857 ENST00000433352 0.011±0.00 N/A 0.031±0.00 0.037±0.02 N/A 0.010±0.00 0.090±0.00 0.011±0.00 0.080±0.00 0.319±0.00 N/A N/A N/A 0.012±0.00
ENSG00000237963 ENST00000454528 N/A N/A N/A N/A 0.076±0.00 N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000237971 ENST00000451184 N/A 0.057±0.00 0.425±0.00 0.077±0.07 1.727±0.00 N/A 0.018±0.00 N/A N/A 0.145±0.12 N/A 0.685±0.00 N/A 0.017±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035045 ENSMUST00000082183 N/A 0.389±0.10 N/A N/A 0.184±0.05 0.173±0.05 0.037±0.00 0.065±0.00 0.042±0.00 0.257±0.00 N/A 0.603±0.27 N/A 0.062±0.02
ENSMUST00000127461 N/A 0.615±0.00 N/A N/A N/A 0.291±0.06 N/A N/A 0.085±0.02 N/A N/A N/A N/A N/A
ENSMUST00000145362 0.393±0.26 0.101±0.05 0.507±0.24 0.755±0.00 0.209±0.04 0.250±0.11 0.117±0.01 0.204±0.05 0.067±0.03 0.186±0.00 0.039±0.02 0.319±0.15 0.233±0.07 0.043±0.03
ENSMUST00000150123 N/A 0.519±0.24 0.473±0.00 N/A 0.181±0.05 0.271±0.04 N/A 0.116±0.00 0.040±0.01 0.223±0.08 0.034±0.01 0.535±0.20 0.103±0.00 0.086±0.01
ENSMUSG00000035062 ENSMUST00000044382 1.217±0.64 N/A 3.833±0.22 13.102±8.50 0.615±0.18 N/A 0.530±0.04 0.919±0.25 0.839±0.33 1.010±0.22 0.355±0.08 1.461±1.31 1.269±0.69 0.248±0.13
ENSMUST00000119640 1.538±1.00 0.884±0.32 0.568±0.00 3.408±2.13 0.791±0.41 0.725±0.30 0.199±0.00 0.694±0.48 0.339±0.17 0.884±0.30 0.157±0.07 1.979±0.83 0.417±0.15 0.144±0.00
ENSMUST00000120620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.447±0.00 1.019±0.26 0.437±0.00 0.014±0.00
ENSMUSG00000071721 ENSMUST00000096366 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.445±0.24 0.013±0.00 137.013±43.36

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