C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 12B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338957 ZC3H12B-002 ENSG00000102053 9606 + X:65488735-65507887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338957
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338957 0.467±0.18 0.166±0.00 0.039±0.02 0.104±0.00 0.027±0.00 0.201±0.15 0.041±0.02 0.183±0.16 0.023±0.01 0.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SM CIL_0001SM_0002 CGP X:64915802-65507887
CIL_0001SP CIL_0001SP_0002 CGP X:65366638-65534775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0046872 IEA metal ion binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082183 Zc3h12b-004 protein_coding Mus_musculus 0 3321
ENSMUST00000145362 Zc3h12b-002 nonsense_mediated_decay Mus_musculus 0 2767
ENSMUST00000150123 Zc3h12b-001 processed_transcript Mus_musculus 0 1303
ENSMUST00000127461 Zc3h12b-003 protein_coding Mus_musculus 0 904

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