C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000000476-ENSDARG00000014333 CGP 7955 9:42039266-42107217
GeneTranscriptPositionBiotype
ENSDARG00000000476 (pms1)
PMS1 postmeiotic segregation increased 1 (S. cerevisiae) 		ENSDART00000002053 (pms1-001) 42039266-42098105 protein_coding
ENSDARG00000014333 (ormdl1)
ORM1-like 1 (S. cerevisiae) 		ENSDART00000014660 (ormdl1-001) 42098016-42107217 protein_coding
ENSDART00000144467 (ormdl1-002) 42098068-42103643 protein_coding
ENSDARG00000084861 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120261 (5S_rRNA.865-201) 42053887-42054001 rRNA

Danio rerio Ensembl (Zv9)

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CIL_0001W3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026098-ENSMUSG00000026097 CGP 10090 1:53189187-53310309
GeneTranscriptPositionBiotype
ENSMUSG00000026097 (Ormdl1)
ORM1-like 1 (S. cerevisiae) 		ENSMUST00000027266 (Ormdl1-001) 53297095-53310309 protein_coding
ENSMUST00000135746 (Ormdl1-002) 53297095-53301953 retained_intron
ENSMUSG00000026098 (Pms1)
postmeiotic segregation increased 1 (S. cerevisiae) 		ENSMUST00000027267 (Pms1-001) 53189187-53297018 protein_coding
ENSMUST00000126412 (Pms1-005) 53281947-53297015 protein_coding
ENSMUST00000126590 (Pms1-004) 53275143-53297015 protein_coding
ENSMUST00000128337 (Pms1-006) 53267863-53296975 protein_coding
ENSMUST00000133358 (Pms1-007) 53275121-53282408 protein_coding
ENSMUST00000135246 (Pms1-002) 53197112-53297017 protein_coding
ENSMUST00000142922 (Pms1-003) 53262895-53296967 processed_transcript
ENSMUST00000188890 (Pms1-008) 53295293-53297015 retained_intron
ENSMUSG00000100679 (RP24-93I18.2)
predicted gene 28778 		ENSMUST00000190734 (RP24-93I18.2-001) 53297111-53318035 protein_coding
ENSMUSG00000100763 (RP24-481M4.1)
predicted gene 28777 		ENSMUST00000191402 (RP24-481M4.1-001) 53196113-53197695 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W3_0001ENSDARG00000000476ENSDART00000002053ENSDARG00000014333ENSDART00000014660ENSDART00000144467ENSDARG00000084861ENSDART00000120261CIL_0001W3_0002ENSMUSG00000026097ENSMUST00000027266ENSMUST00000135746ENSMUSG00000026098ENSMUST00000027267ENSMUST00000126412ENSMUST00000126590ENSMUST00000128337ENSMUST00000133358ENSMUST00000135246ENSMUST00000142922ENSMUST00000188890ENSMUSG00000100679ENSMUST00000190734ENSMUSG00000100763ENSMUST00000191402
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W3_0001ENSDARG00000000476ENSDART00000002053ENSDARG00000014333ENSDART00000014660ENSDART00000144467ENSDARG00000084861ENSDART00000120261CIL_0001W3_0002ENSMUSG00000026097ENSMUST00000027266ENSMUSG00000026098ENSMUST00000027267ENSMUST00000126412ENSMUST00000126590ENSMUST00000128337ENSMUST00000133358ENSMUST00000135246ENSMUST00000142922ENSMUST00000188890ENSMUSG00000100679ENSMUST00000190734ENSMUSG00000100763ENSMUST00000191402
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000000476 ENSDART00000002053 N/A N/A N/A 0.986±0.00 N/A N/A 1.559±0.00 N/A 0.246±0.00 N/A 0.823±0.00 N/A N/A N/A
ENSDARG00000014333 ENSDART00000014660 N/A N/A N/A 19.431±1.28 N/A N/A 36.542±4.70 9.218±0.32 0.555±0.00 N/A 13.770±0.00 N/A N/A N/A
ENSDART00000144467 N/A N/A N/A N/A N/A N/A N/A N/A 1.949±0.00 N/A 6.944±0.00 N/A N/A N/A
ENSDARG00000084861 ENSDART00000120261 N/A N/A N/A 8.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026097 ENSMUST00000027266 5.226±1.35 8.415±1.93 25.842±3.93 18.891±7.40 6.159±1.32 6.779±1.52 5.013±0.67 7.797±1.24 14.362±3.49 7.465±0.62 N/A 7.587±2.26 10.954±5.63 N/A
ENSMUST00000135746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026098 ENSMUST00000027267 0.336±0.18 0.336±0.02 0.868±0.01 1.011±0.27 0.387±0.13 0.371±0.10 0.279±0.08 0.385±0.10 1.107±0.88 0.398±0.16 0.417±0.13 0.648±0.37 1.469±0.73 0.301±0.05
ENSMUST00000126412 N/A 0.344±0.07 N/A N/A 0.576±0.23 0.443±0.25 0.763±0.03 0.850±0.00 N/A 0.493±0.00 N/A 0.337±0.06 N/A N/A
ENSMUST00000126590 N/A 0.236±0.00 N/A N/A N/A N/A N/A 0.589±0.00 N/A N/A N/A 0.650±0.39 N/A N/A
ENSMUST00000128337 0.219±0.00 0.307±0.13 N/A 2.521±0.00 N/A 0.177±0.05 0.245±0.00 0.397±0.00 0.837±0.24 0.286±0.04 0.499±0.00 0.684±0.71 4.727±0.00 N/A
ENSMUST00000133358 N/A 0.246±0.00 N/A N/A 0.627±0.07 N/A N/A N/A N/A N/A N/A 0.501±0.00 N/A N/A
ENSMUST00000135246 N/A 0.211±0.11 N/A 0.507±0.13 0.251±0.08 0.313±0.07 0.140±0.04 0.180±0.06 0.541±0.39 0.415±0.00 0.176±0.03 0.468±0.40 0.706±0.32 0.890±0.00
ENSMUST00000142922 N/A 0.111±0.03 N/A N/A 0.106±0.02 0.062±0.00 0.069±0.00 N/A 0.206±0.05 0.077±0.00 0.103±0.01 0.166±0.07 N/A N/A
ENSMUST00000188890 0.089±0.00 N/A N/A N/A 0.399±0.15 0.302±0.10 N/A 0.289±0.08 N/A 0.187±0.02 N/A N/A N/A N/A
ENSMUSG00000100679 ENSMUST00000190734 15.842±3.75 21.404±4.45 N/A N/A 20.898±3.30 29.493±6.08 N/A 20.883±2.66 26.655±3.67 18.576±2.08 N/A 34.895±9.85 N/A N/A
ENSMUSG00000100763 ENSMUST00000191402 N/A N/A N/A N/A 0.651±0.13 0.711±0.00 N/A N/A N/A N/A N/A N/A N/A 0.949±0.26

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