C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polysaccharide biosynthesis domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373358 PBDC1-001 ENSG00000102390 9606 + X:76172936-76178204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373358
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373358 3.367±0.00 11.711±0.00 1.664±0.00 2.004±1.53 3.172±2.65 4.212±3.19 2.227±1.93 6.473±5.53 3.396±2.52 4.771±0.00 4.999±0.00 12.737±8.16 11.161±2.47 6.167±1.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OH CIL_0006OH_0001 CGP X:75782988-76178204
CIL_0001YK CIL_0001YK_0001 CGP X:76172936-76431353

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033577 Pbdc1-001 protein_coding Mus_musculus 0 551
ENSMUST00000173971 Gm19807-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119477 Pbdc1-003 protein_coding Mus_musculus 0 420
ENSMUST00000125343 Pbdc1-002 retained_intron Mus_musculus 0 196

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