C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000067694-ENSDARG00000089020 CGP 7955 5:56670876-56763258
GeneTranscriptPositionBiotype
ENSDARG00000067694 (zgc:158260)
zgc:158260 		ENSDART00000114709 (zgc:158260-201) 56670876-56683246 protein_coding
ENSDARG00000086135 (fam189a2)
family with sequence similarity 189, member A2 		ENSDART00000083176 (fam189a2-202) 56719273-56725655 protein_coding
ENSDART00000142899 (fam189a2-002) 56622607-56733947 nonsense_mediated_decay
ENSDART00000150805 (fam189a2-001) 56719056-56734002 protein_coding
ENSDARG00000089020 (zgc:158260)
zgc:158260 		ENSDART00000097499 (zgc:158260-202) 56751666-56763258 protein_coding
CIL_0001YY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189157-ENSG00000272414 CGP 9606 4:76214040-76311129
GeneTranscriptPositionBiotype
ENSG00000118804 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000237642 (FAM47E-STBD1-001) 76306026-76311599 protein_coding
ENSG00000189157 (FAM47E)
family with sequence similarity 47, member E 		ENST00000424749 (FAM47E-001) 76251741-76283754 protein_coding
ENST00000502320 (FAM47E-002) 76251733-76283779 retained_intron
ENST00000510197 (FAM47E-007) 76214040-76283780 protein_coding
ENST00000510328 (FAM47E-006) 76251700-76278655 retained_intron
ENST00000511946 (FAM47E-011) 76278119-76283774 processed_transcript
ENST00000512895 (FAM47E-009) 76214104-76268769 protein_coding
ENST00000515589 (FAM47E-003) 76236269-76256460 processed_transcript
ENST00000606246 (FAM47E-013) 76256453-76268911 protein_coding
ENST00000606550 (FAM47E-012) 76267506-76269614 retained_intron
ENSG00000272414 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000509377 (FAM47E-STBD1-003) 76251733-76310044 nonsense_mediated_decay
ENST00000514140 (FAM47E-STBD1-001) 76263812-76311129 protein_coding
ENST00000514365 (FAM47E-STBD1-002) 76251732-76310379 nonsense_mediated_decay
ENST00000515604 (FAM47E-STBD1-004) 76251721-76311120 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YY_0001ENSDARG00000067694ENSDART00000114709ENSDARG00000086135ENSDART00000083176ENSDART00000142899ENSDART00000150805ENSDARG00000089020ENSDART00000097499CIL_0001YY_0002ENSG00000118804ENST00000237642ENSG00000189157ENST00000424749ENST00000502320ENST00000510197ENST00000510328ENST00000511946ENST00000512895ENST00000515589ENST00000606246ENST00000606550ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604
Region; Gene Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YY_0001ENSDARG00000067694ENSDART00000114709ENSDARG00000086135ENSDART00000083176ENSDART00000142899ENSDART00000150805ENSDARG00000089020ENSDART00000097499CIL_0001YY_0002ENSG00000118804ENST00000237642ENSG00000189157ENST00000424749ENST00000502320ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604
Gene Transcript Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000067694 ENSDART00000114709 N/A N/A 0.154±0.08 N/A N/A N/A 0.636±0.47 N/A N/A N/A N/A N/A N/A
ENSDARG00000086135 ENSDART00000083176 N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142899 N/A N/A 1.664±1.52 N/A N/A 2.106±1.85 0.243±0.00 0.297±0.00 N/A 5.833±0.00 N/A N/A N/A
ENSDART00000150805 N/A N/A 0.341±0.00 N/A N/A 1.128±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000089020 ENSDART00000097499 N/A N/A 0.113±0.05 N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118804 ENST00000237642 1.846±0.00 0.396±0.00 0.713±0.00 5.360±3.12 1.839±0.01 2.464±1.51 7.938±0.00 1.787±0.00 1.900±1.02 5.758±0.21 1.761±0.44 4.118±0.77 2.481±0.38
ENSG00000189157 ENST00000424749 N/A 0.980±0.00 1.019±0.00 N/A N/A N/A 2.599±0.00 N/A N/A N/A N/A N/A N/A
ENST00000502320 N/A N/A 1.392±0.00 N/A N/A 0.139±0.00 0.476±0.00 N/A N/A N/A N/A N/A 0.903±0.00
ENST00000510197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272414 ENST00000509377 N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A N/A
ENST00000514140 2.345±0.00 N/A N/A N/A 2.225±0.00 0.997±0.00 1.507±0.00 N/A N/A N/A 3.788±1.14 3.051±1.55 3.103±0.00
ENST00000514365 1.706±0.00 N/A N/A N/A N/A N/A N/A 2.333±0.00 N/A N/A 4.475±0.00 6.419±0.00 3.305±0.00
ENST00000515604 N/A N/A 3.165±0.00 N/A N/A N/A N/A N/A 4.751±0.00 N/A 0.755±0.00 N/A 2.772±0.16

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