C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FAM47E-STBD1 readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000118804 FAM47E-STBD1 9606 + 4:76306026-76311599 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000237642 FAM47E-STBD1-001 76306026-76311599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000237642
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000237642 1.846±0.00 0.396±0.00 0.713±0.00 5.360±3.12 1.839±0.01 2.464±1.51 7.938±0.00 1.787±0.00 1.900±1.02 5.758±0.21 1.761±0.44 4.118±0.77 2.481±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0001 VISTA 4:76031495-76631676
CIL_0001YY CIL_0001YY_0002 CGP 4:76214040-76311129
CIL_00071I CIL_00071I_0001 CGP 4:76251721-76311599
CIL_00071P CIL_00071P_0001 CGP 4:76306026-76421868

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006936 TAS muscle contraction
GO:0016020 TAS membrane
GO:0030246 IEA carbohydrate binding
GO:2001070 IEA starch binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086641 stbd1 starch binding domain 1 protein_coding Danio_rerio
ENSMUSG00000047963 Stbd1 starch binding domain 1 protein_coding Mus_musculus

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