C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Z0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077189-ENSDARG00000079701 CGP 7955 Zv9_scaffold3489:60733-100755
GeneTranscriptPositionBiotype
ENSDARG00000077189 (INTS5 (1 of 2))
integrator complex subunit 5 		ENSDART00000109483 (INTS5 (1 of 2)-201) 60733-64679 protein_coding
ENSDARG00000079701 (GANAB (3 of 3))
glucosidase, alpha; neutral AB 		ENSDART00000113271 (GANAB (3 of 3)-201) 65006-100755 protein_coding
CIL_0001Z0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071652-ENSMUSG00000071650 CGP 10090 19:8888926-8916663
GeneTranscriptPositionBiotype
ENSMUSG00000071650 (Ganab)
alpha glucosidase 2 alpha neutral subunit 		ENSMUST00000096246 (Ganab-201) 8898090-8916663 protein_coding
ENSMUSG00000071652 (Ints5)
integrator complex subunit 5 		ENSMUST00000096249 (Ints5-201) 8892987-8897890 protein_coding
ENSMUST00000188635 (Ints5-002) 8890529-8895227 processed_transcript
ENSMUST00000191089 (Ints5-001) 8888926-8895064 protein_coding
ENSMUSG00000071653 (1810009A15Rik)
RIKEN cDNA 1810009A15 gene 		ENSMUST00000096251 (1810009A15Rik-001) 8888853-8890881 protein_coding
ENSMUST00000185488 (1810009A15Rik-004) 8888915-8890546 nonsense_mediated_decay
ENSMUST00000186647 (1810009A15Rik-003) 8888899-8890746 retained_intron
ENSMUST00000187037 (1810009A15Rik-006) 8888929-8890465 retained_intron
ENSMUST00000190843 (1810009A15Rik-005) 8888939-8890741 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z0_0001ENSDARG00000077189ENSDART00000109483ENSDARG00000079701ENSDART00000113271CIL_0001Z0_0002ENSMUSG00000071650ENSMUST00000096246ENSMUSG00000071652ENSMUST00000096249ENSMUST00000188635ENSMUST00000191089ENSMUSG00000071653ENSMUST00000096251ENSMUST00000185488ENSMUST00000186647ENSMUST00000187037ENSMUST00000190843
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z0_0001ENSDARG00000077189ENSDART00000109483ENSDARG00000079701ENSDART00000113271CIL_0001Z0_0002ENSMUSG00000071650ENSMUST00000096246ENSMUSG00000071652ENSMUST00000096249ENSMUST00000191089ENSMUSG00000071653ENSMUST00000096251ENSMUST00000185488
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000077189 ENSDART00000109483 N/A N/A N/A 0.061±0.04 N/A N/A 0.179±0.14 0.162±0.00 0.031±0.00 N/A 0.021±0.00 N/A N/A N/A
ENSDARG00000079701 ENSDART00000113271 N/A N/A N/A 11.955±4.23 N/A N/A 3.613±0.92 11.791±1.79 1.745±0.00 N/A 1.277±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000071650 ENSMUST00000096246 58.187±13.82 18.242±10.82 33.667±7.32 34.178±16.00 26.251±8.68 22.596±11.59 13.093±7.17 38.242±20.66 36.851±17.93 35.247±19.16 4.634±1.96 36.547±21.47 46.104±20.84 17.985±8.10
ENSMUSG00000071652 ENSMUST00000096249 13.590±4.84 12.688±0.72 9.782±0.72 14.318±1.23 11.643±2.47 11.837±2.17 4.153±0.62 7.756±0.90 8.154±4.91 10.798±0.17 3.534±0.47 16.708±4.69 12.922±5.48 3.538±1.46
ENSMUST00000188635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.889±0.00
ENSMUSG00000071653 ENSMUST00000096251 9.897±0.00 N/A 25.965±4.01 10.662±5.68 N/A N/A 5.678±0.13 11.779±1.79 33.833±22.48 N/A 7.045±0.67 18.108±3.12 33.818±18.48 21.429±9.15
ENSMUST00000185488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.880±0.00
ENSMUST00000186647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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