C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alpha glucosidase 2 alpha neutral subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096246 Ganab-201 ENSMUSG00000071650 10090 + 19:8898090-8916663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096246
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096246 58.187±13.82 18.242±10.82 33.667±7.32 34.178±16.00 26.251±8.68 22.596±11.59 13.093±7.17 38.242±20.66 36.851±17.93 35.247±19.16 4.634±1.96 36.547±21.47 46.104±20.84 17.985±8.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760
CIL_0001Z0 CIL_0001Z0_0002 CGP 19:8888926-8916663

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 TAS endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006491 TAS N-glycan processing
GO:0015926 ISA glucosidase activity
GO:0016020 IEA membrane
GO:0017177 IPI glucosidase II complex
GO:0030246 IEA carbohydrate binding
GO:0033919 IEA glucan 1,3-alpha-glucosidase activity
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346178 GANAB-002 protein_coding Homo_sapiens 0 3570
ENST00000356638 GANAB-001 protein_coding Homo_sapiens 0 2839
ENST00000525994 GANAB-011 protein_coding Homo_sapiens 0 375
ENST00000526210 GANAB-012 nonsense_mediated_decay Homo_sapiens 2.8026e-45 185
ENST00000526392 GANAB-010 retained_intron Homo_sapiens 0.00000000004 71
ENST00000526732 GANAB-007 retained_intron Homo_sapiens 0 514
ENST00000528503 GANAB-013 retained_intron Homo_sapiens 0 479
ENST00000529737 GANAB-016 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000532402 GANAB-004 nonsense_mediated_decay Homo_sapiens 0 2839
ENST00000534419 GANAB-005 processed_transcript Homo_sapiens 0 510
ENST00000534422 GANAB-008 processed_transcript Homo_sapiens 0 664
ENST00000534613 GANAB-015 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000534779 GANAB-003 protein_coding Homo_sapiens 0 2981
ENST00000540933 GANAB-201 protein_coding Homo_sapiens 0 2839

Loading