C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045041 Galnt12-001 ENSMUSG00000039774 10090 + 4:47091909-47123070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045041
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045041 2.345±2.06 1.189±0.35 1.298±0.05 0.403±0.10 2.904±1.02 61.707±6.82 0.350±0.06 1.739±0.12 0.206±0.09 1.703±0.79 0.281±0.23 4.996±2.63 1.305±0.48 1.084±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000201 CIL_000201_0002 CGP 4:47015669-47123070
CIL_000200 CIL_000200_0002 CGP 4:47091909-47313167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375011 GALNT12-001 protein_coding Homo_sapiens 0 1633
ENST00000615204 GALNT12-004 retained_intron Homo_sapiens 0 353

Loading