C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000204_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170681-ENSG00000148123 CGP 9606 9:100578079-101325135
GeneTranscriptPositionBiotype
ENSG00000148123 (RP11-35N6.1)
Lipid phosphate phosphatase-related protein type 1 		ENST00000374874 (RP11-35N6.1-002) 101028709-101325135 protein_coding
ENST00000395056 (RP11-35N6.1-003) 101185035-101325131 protein_coding
ENST00000456287 (RP11-35N6.1-001) 101131522-101286160 protein_coding
ENST00000463206 (RP11-35N6.1-004) 101269802-101312894 processed_transcript
ENST00000494890 (RP11-35N6.1-006) 101185035-101188026 processed_transcript
ENSG00000170681 (MURC)
muscle-related coiled-coil protein 		ENST00000307584 (MURC-001) 100578079-100587906 protein_coding
ENSG00000200966 (RN7SKP87)
RNA, 7SK small nuclear pseudogene 87 		ENST00000364096 (RN7SKP87-201) 100581079-100581379 misc_RNA
ENSG00000229541 (GAPDHP26)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 26 		ENST00000436818 (GAPDHP26-001) 100975668-100976682 processed_pseudogene
ENSG00000230161 (RP11-62L10.1)
 ENST00000457882 (RP11-62L10.1-001) 100912320-100912741 processed_pseudogene
ENSG00000237999 (RP11-394D2.1)
 ENST00000418987 (RP11-394D2.1-001) 100731240-100732355 processed_pseudogene
ENSG00000238143 (RP11-70K10.2)
 ENST00000417933 (RP11-70K10.2-001) 101125436-101125921 processed_pseudogene
ENSG00000253041 (SNORA31)
Small nucleolar RNA SNORA31 		ENST00000517232 (SNORA31.1-224) 101322477-101322533 snoRNA
CIL_000204_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028348-ENSMUSG00000063446 CGP 10090 4:48663514-49340259
GeneTranscriptPositionBiotype
ENSMUSG00000028348 (Murc)
muscle-related coiled-coil protein 		ENSMUST00000030033 (Murc-001) 48663514-48673502 protein_coding
ENSMUSG00000063446 (E130309F12Rik)
lipid phosphate phosphatase-related protein type 1 		ENSMUST00000076670 (E130309F12Rik-001) 49059282-49340259 protein_coding
ENSMUST00000137884 (E130309F12Rik-002) 49059273-49208600 retained_intron
ENSMUST00000151692 (E130309F12Rik-003) 49059456-49302269 retained_intron
ENSMUSG00000064782 (Gm22685)
predicted gene, 22685 		ENSMUST00000082848 (Gm22685-201) 49289298-49289403 snRNA
ENSMUSG00000080850 (Gm12439)
predicted gene 12439 		ENSMUST00000117162 (Gm12439-001) 48675156-48675520 processed_pseudogene
ENSMUSG00000082384 (Gm12437)
predicted gene 12437 		ENSMUST00000120244 (Gm12437-001) 48807137-48807391 processed_pseudogene
ENSMUSG00000083869 (Gm12442)
predicted gene 12442 		ENSMUST00000118372 (Gm12442-001) 48972978-48973315 processed_pseudogene
ENSMUSG00000084787 (Gm12436)
predicted gene 12436 		ENSMUST00000131099 (Gm12436-001) 48898593-48963237 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000204_0001ENSG00000148123ENST00000374874ENST00000395056ENST00000456287ENST00000463206ENST00000494890ENSG00000170681ENST00000307584ENSG00000200966ENST00000364096ENSG00000229541ENST00000436818ENSG00000230161ENST00000457882ENSG00000237999ENST00000418987ENSG00000238143ENST00000417933ENSG00000253041ENST00000517232CIL_000204_0002ENSMUSG00000028348ENSMUST00000030033ENSMUSG00000063446ENSMUST00000076670ENSMUST00000137884ENSMUST00000151692ENSMUSG00000064782ENSMUST00000082848ENSMUSG00000080850ENSMUST00000117162ENSMUSG00000082384ENSMUST00000120244ENSMUSG00000083869ENSMUST00000118372ENSMUSG00000084787ENSMUST00000131099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000204_0001ENSG00000148123ENST00000374874ENST00000395056ENST00000456287ENST00000463206ENST00000494890ENSG00000170681ENST00000307584ENSG00000200966ENST00000364096ENSG00000229541ENST00000436818ENSG00000230161ENST00000457882ENSG00000237999ENST00000418987ENSG00000238143ENST00000417933ENSG00000253041ENST00000517232CIL_000204_0002ENSMUSG00000028348ENSMUST00000030033ENSMUSG00000063446ENSMUST00000076670ENSMUST00000137884ENSMUST00000151692ENSMUSG00000064782ENSMUST00000082848ENSMUSG00000080850ENSMUST00000117162ENSMUSG00000082384ENSMUST00000120244ENSMUSG00000083869ENSMUST00000118372ENSMUSG00000084787ENSMUST00000131099
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148123 ENST00000374874 N/A N/A N/A 0.963±0.24 0.147±0.00 N/A N/A 2.699±0.00 0.242±0.00 N/A N/A 0.023±0.00 0.032±0.00 0.293±0.04
ENST00000395056 N/A N/A 2.138±0.00 1.297±0.83 0.186±0.00 N/A N/A 1.809±0.91 0.226±0.00 0.488±0.00 N/A 0.101±0.00 N/A N/A
ENST00000456287 N/A N/A 5.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463206 N/A N/A N/A 5.895±1.09 0.278±0.08 N/A N/A 0.899±0.00 N/A N/A N/A 0.066±0.00 N/A 0.791±0.14
ENST00000494890 N/A N/A 1.861±0.00 N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A
ENSG00000170681 ENST00000307584 0.044±0.00 0.270±0.00 N/A 0.516±0.12 1.165±0.89 0.091±0.01 8.348±4.45 0.061±0.00 0.127±0.03 0.200±0.15 14.132±0.74 0.112±0.04 0.125±0.04 2.136±0.63
ENSG00000200966 ENST00000364096 N/A N/A 2.617±0.00 0.372±0.00 N/A N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000229541 ENST00000436818 N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.012±0.00 0.012±0.00 N/A N/A 0.090±0.00
ENSG00000230161 ENST00000457882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00
ENSG00000237999 ENST00000418987 0.072±0.00 0.059±0.00 N/A 0.135±0.00 0.086±0.00 0.311±0.00 N/A 0.062±0.00 0.069±0.00 0.038±0.00 0.033±0.00 0.024±0.00 N/A 0.054±0.00
ENSG00000238143 ENST00000417933 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253041 ENST00000517232 N/A N/A N/A 1.421±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028348 ENSMUST00000030033 0.077±0.02 N/A N/A 0.915±0.33 0.884±0.84 0.106±0.00 9.451±1.91 0.249±0.06 0.042±0.03 0.683±0.47 33.401±3.94 0.169±0.05 0.600±0.18 0.637±0.62
ENSMUSG00000063446 ENSMUST00000076670 0.153±0.05 0.024±0.00 0.003±0.00 8.628±5.63 0.045±0.03 0.051±0.02 N/A 0.540±0.08 0.122±0.14 0.025±0.01 0.005±0.00 0.047±0.02 0.022±0.02 0.014±0.01
ENSMUST00000137884 N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A 0.060±0.01 N/A N/A 0.074±0.00 N/A 0.015±0.00
ENSMUST00000151692 N/A N/A N/A N/A 0.128±0.02 N/A N/A N/A N/A N/A N/A 0.189±0.14 N/A N/A
ENSMUSG00000064782 ENSMUST00000082848 N/A N/A N/A N/A N/A N/A N/A 2527.650±0.00 N/A N/A N/A N/A N/A 47.907±0.00
ENSMUSG00000080850 ENSMUST00000117162 0.266±0.10 N/A 0.179±0.01 1.152±0.29 0.956±0.65 0.433±0.13 N/A 0.386±0.00 0.171±0.05 0.423±0.12 N/A 1.153±0.60 0.749±0.35 0.480±0.22
ENSMUSG00000082384 ENSMUST00000120244 18.057±0.00 N/A 9.859±0.71 3.951±3.33 N/A N/A N/A 14.803±2.42 2.298±1.59 19.544±2.83 N/A 29.638±36.98 62.150±4.52 10.893±0.00
ENSMUSG00000083869 ENSMUST00000118372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.211±0.00
ENSMUSG00000084787 ENSMUST00000131099 N/A N/A 0.003±0.00 N/A 0.047±0.01 N/A N/A N/A N/A N/A 0.010±0.00 0.006±0.00 0.010±0.00 N/A

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