C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00022G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061945-ENSDARG00000013175 CGP 7955 24:31119016-31170430
GeneTranscriptPositionBiotype
ENSDARG00000013175 (cpne3)
copine III
ENSDART00000011886 (cpne3-001) 31142167-31170430 protein_coding
ENSDART00000126256 (cpne3-201) 31139024-31165481 protein_coding
CIL_00022G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056494-ENSMUSG00000028228 CGP 10090 4:19280850-19570108
GeneTranscriptPositionBiotype
ENSMUSG00000028228 (Cpne3)
copine III
ENSMUST00000029885 (Cpne3-001) 19519254-19570108 protein_coding
ENSMUST00000108254 (Cpne3-002) 19549575-19570083 retained_intron
ENSMUST00000134025 (Cpne3-003) 19540612-19543678 processed_transcript
ENSMUSG00000056494 (Cngb3)
cyclic nucleotide gated channel beta 3
ENSMUST00000102999 (Cngb3-001) 19280850-19510623 protein_coding
ENSMUSG00000082320 (Gm11877)
predicted gene 11877
ENSMUST00000118921 (Gm11877-001) 19298333-19299184 processed_pseudogene
ENSMUSG00000089090 (Gm25655)
predicted gene, 25655
ENSMUST00000158465 (Gm25655-201) 19514490-19514779 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022G_0001ENSDARG00000013175ENSDART00000011886ENSDART00000126256CIL_00022G_0002ENSMUSG00000028228ENSMUST00000029885ENSMUST00000108254ENSMUST00000134025ENSMUSG00000056494ENSMUST00000102999ENSMUSG00000082320ENSMUST00000118921ENSMUSG00000089090ENSMUST00000158465
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022G_0001ENSDARG00000013175ENSDART00000011886ENSDART00000126256CIL_00022G_0002ENSMUSG00000028228ENSMUST00000029885ENSMUSG00000056494ENSMUST00000102999ENSMUSG00000082320ENSMUST00000118921ENSMUSG00000089090ENSMUST00000158465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013175 ENSDART00000011886 N/A N/A N/A N/A N/A N/A N/A N/A 0.488±0.00 N/A N/A N/A N/A N/A
ENSDART00000126256 N/A N/A N/A 3.503±0.92 N/A N/A 14.938±13.58 7.253±0.57 0.390±0.00 N/A 3.616±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028228 ENSMUST00000029885 15.555±4.58 16.455±2.05 15.201±0.49 2.293±1.13 13.083±3.01 16.035±3.22 5.992±0.42 15.574±1.78 9.616±4.31 21.284±0.70 1.768±0.20 15.778±5.07 6.237±2.81 1.274±0.54
ENSMUST00000108254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056494 ENSMUST00000102999 0.016±0.00 N/A 0.002±0.00 0.011±0.00 0.014±0.00 N/A 0.274±0.09 N/A 0.002±0.00 N/A N/A 0.004±0.00 0.006±0.00 0.839±0.58
ENSMUSG00000082320 ENSMUST00000118921 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A 0.114±0.00 0.073±0.05
ENSMUSG00000089090 ENSMUST00000158465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.602±0.00 N/A

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