C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11877
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118921 Gm11877-001 ENSMUSG00000082320 10090 + 4:19298333-19299184 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaTestisENSMUST00000118921
Transcript ID Liver Placenta Testis
ENSMUST00000118921 0.012±0.00 0.114±0.00 0.073±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022G CIL_00022G_0002 CGP 4:19280850-19570108

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322030 SET-002 protein_coding Homo_sapiens 0 953
ENST00000372686 SET-010 protein_coding Homo_sapiens 0 952
ENST00000372688 SET-201 protein_coding Homo_sapiens 0 952
ENST00000372692 SET-001 protein_coding Homo_sapiens 0 972
ENST00000409104 SET-003 protein_coding Homo_sapiens 0 952
ENST00000412243 SETP22-001 processed_pseudogene Homo_sapiens 0 852
ENST00000412724 SETP15-001 processed_pseudogene Homo_sapiens 0 233
ENST00000423837 SETP9-001 transcribed_processed_pseudogene Homo_sapiens 0 634
ENST00000424368 SETP10-001 processed_pseudogene Homo_sapiens 0 617
ENST00000435341 SETP8-001 processed_pseudogene Homo_sapiens 0 619
ENST00000455717 SETP4-001 processed_pseudogene Homo_sapiens 0 817
ENST00000457046 SETP20-001 processed_pseudogene Homo_sapiens 0 819
ENST00000466009 SET-005 processed_transcript Homo_sapiens 8.00001e-42 174
ENST00000477806 SET-008 processed_transcript Homo_sapiens 0 872
ENST00000479329 SETP6-001 processed_pseudogene Homo_sapiens 0 501
ENST00000480217 SET-004 processed_transcript Homo_sapiens 0 532
ENST00000480536 SET-012 retained_intron Homo_sapiens 0 431
ENST00000485056 SET-011 retained_intron Homo_sapiens 0 278
ENST00000485873 SETSIP-001 protein_coding Homo_sapiens 0 948
ENST00000497538 SETP14-001 processed_pseudogene Homo_sapiens 0 950
ENST00000514799 SETP21-001 processed_pseudogene Homo_sapiens 0 726
ENST00000534163 SETP17-001 processed_pseudogene Homo_sapiens 0 599
ENST00000552169 SETP7-001 processed_pseudogene Homo_sapiens 0 442
ENST00000553886 SETP2-001 processed_pseudogene Homo_sapiens 0 688
ENST00000556014 SETP1-001 processed_pseudogene Homo_sapiens 0 695
ENST00000581726 SETP3-001 processed_pseudogene Homo_sapiens 0 846
ENST00000596516 SETSIP-201 protein_coding Homo_sapiens 0 948

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