C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclic nucleotide gated channel beta 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102999 Cngb3-001 ENSMUSG00000056494 10090 + 4:19280850-19510623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000102999
Transcript ID Adipose Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000102999 0.016±0.00 0.002±0.00 0.011±0.00 0.014±0.00 0.274±0.09 0.002±0.00 0.004±0.00 0.006±0.00 0.839±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022G CIL_00022G_0002 CGP 4:19280850-19570108

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IPI intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005515 IPI protein binding
GO:0005886 IC plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0007601 IEA visual perception
GO:0007603 IBA phototransduction, visible light
GO:0009187 IC cyclic nucleotide metabolic process
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport
GO:1902495 IEA transmembrane transporter complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320005 CNGB3-001 protein_coding Homo_sapiens 0 1478

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