C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109705-ENSG00000038219 CGP 9606 4:13540830-13627723
GeneTranscriptPositionBiotype
ENSG00000038219 (BOD1L1)
biorientation of chromosomes in cell division 1-like 1 		ENST00000040738 (BOD1L1-001) 13568738-13627723 protein_coding
ENST00000482713 (BOD1L1-002) 13613506-13627701 nonsense_mediated_decay
ENST00000505343 (BOD1L1-006) 13569786-13578201 retained_intron
ENST00000507943 (BOD1L1-004) 13569506-13581048 protein_coding
ENST00000509897 (BOD1L1-005) 13577581-13580066 retained_intron
ENST00000511119 (BOD1L1-003) 13582230-13593520 retained_intron
ENSG00000109705 (NKX3-2)
NK3 homeobox 2 		ENST00000382438 (NKX3-2-001) 13540830-13545050 protein_coding
ENSG00000246095 (LINC01096)
long intergenic non-protein coding RNA 1096 		ENST00000501050 (LINC01096-001) 13546076-13547801 lincRNA
ENST00000503938 (LINC01096-002) 13546075-13546964 lincRNA
CIL_00026L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049691-ENSMUSG00000061755 CGP 10090 5:41761483-41844168
GeneTranscriptPositionBiotype
ENSMUSG00000049691 (Nkx3-2)
NK3 homeobox 2 		ENSMUST00000060820 (Nkx3-2-001) 41761483-41764501 protein_coding
ENSMUSG00000061755 (Bod1l)
biorientation of chromosomes in cell division 1-like 		ENSMUST00000050556 (Bod1l-201) 41787542-41844168 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026L_0001ENSG00000038219ENST00000040738ENST00000482713ENST00000505343ENST00000507943ENST00000509897ENST00000511119ENSG00000109705ENST00000382438ENSG00000246095ENST00000501050ENST00000503938CIL_00026L_0002ENSMUSG00000049691ENSMUST00000060820ENSMUSG00000061755ENSMUST00000050556
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026L_0001ENSG00000038219ENST00000040738ENST00000507943ENST00000511119ENSG00000109705ENST00000382438ENSG00000246095ENST00000501050ENST00000503938CIL_00026L_0002ENSMUSG00000049691ENSMUST00000060820ENSMUSG00000061755ENSMUST00000050556
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000038219 ENST00000040738 4.866±0.00 3.155±0.00 N/A 3.186±1.44 2.705±0.54 3.052±1.06 1.924±1.07 2.433±0.89 1.831±0.98 1.592±0.10 0.815±0.43 3.974±2.15 4.905±5.27 5.523±0.00
ENST00000482713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507943 N/A N/A N/A N/A N/A N/A N/A 5.108±0.00 N/A N/A N/A 4.782±0.00 2.156±0.32 N/A
ENST00000509897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511119 N/A N/A N/A N/A N/A 3.643±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000109705 ENST00000382438 N/A 0.574±0.00 N/A 0.027±0.00 0.094±0.04 4.531±3.72 0.022±0.00 0.036±0.00 0.110±0.00 0.011±0.00 0.010±0.00 0.193±0.09 N/A 0.242±0.04
ENSG00000246095 ENST00000501050 N/A 0.250±0.00 N/A N/A 0.044±0.03 0.768±0.00 N/A N/A N/A N/A N/A 0.102±0.06 N/A 4.324±0.00
ENST00000503938 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A 8.427±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049691 ENSMUST00000060820 0.111±0.06 0.039±0.02 0.010±0.00 0.012±0.00 0.059±0.04 3.086±1.30 0.028±0.01 N/A 0.019±0.01 0.015±0.00 N/A 0.049±0.02 0.067±0.03 0.019±0.00
ENSMUSG00000061755 ENSMUST00000050556 0.516±0.23 3.733±1.07 1.772±0.83 3.105±1.65 2.208±0.85 1.684±0.43 0.557±0.29 0.763±0.37 1.735±1.51 2.100±1.04 0.994±0.15 4.101±1.49 5.428±1.53 3.187±3.47

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