C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000249581-ENSG00000002549 CGP 9606 4:17515165-17607972
GeneTranscriptPositionBiotype
ENSG00000002549 (LAP3)
leucine aminopeptidase 3 		ENST00000226299 (LAP3-001) 17577192-17607968 protein_coding
ENST00000503467 (LAP3-003) 17585769-17607972 processed_transcript
ENST00000504614 (LAP3-008) 17584801-17604667 processed_transcript
ENST00000507960 (LAP3-006) 17582380-17585051 processed_transcript
ENST00000508014 (LAP3-007) 17583431-17586067 retained_intron
ENST00000508497 (LAP3-004) 17577426-17582152 retained_intron
ENST00000509583 (LAP3-002) 17577497-17585456 nonsense_mediated_decay
ENST00000512397 (LAP3-005) 17577452-17582689 retained_intron
ENST00000513105 (LAP3-009) 17583602-17606884 protein_coding
ENST00000606142 (LAP3-010) 17577495-17607934 protein_coding
ENST00000618908 (LAP3-201) 17577304-17607967 protein_coding
ENSG00000249488 (NACAP5)
nascent-polypeptide-associated complex alpha polypeptide pseudogene 5 		ENST00000509863 (NACAP5-001) 17552117-17552752 processed_pseudogene
ENSG00000249502 (AC006160.5)
 ENST00000511010 (AC006160.5-001) 17587467-17614571 antisense
ENSG00000249581 (CLRN2)
clarin 2 		ENST00000511148 (CLRN2-001) 17515165-17527104 protein_coding
CIL_00026N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049530-ENSMUSG00000039682 CGP 10090 5:45453751-45512674
GeneTranscriptPositionBiotype
ENSMUSG00000039682 (Lap3)
leucine aminopeptidase 3 		ENSMUST00000046122 (Lap3-001) 45493374-45512674 protein_coding
ENSMUST00000131289 (Lap3-003) 45500339-45504800 retained_intron
ENSMUST00000135413 (Lap3-002) 45498230-45504829 retained_intron
ENSMUST00000137699 (Lap3-004) 45493504-45500736 retained_intron
ENSMUST00000146811 (Lap3-005) 45509209-45511373 retained_intron
ENSMUSG00000049530 (Clrn2)
clarin 2 		ENSMUST00000053250 (Clrn2-201) 45453751-45464149 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026N_0001ENSG00000002549ENST00000226299ENST00000503467ENST00000504614ENST00000507960ENST00000508014ENST00000508497ENST00000509583ENST00000512397ENST00000513105ENST00000606142ENST00000618908ENSG00000249488ENST00000509863ENSG00000249502ENST00000511010ENSG00000249581ENST00000511148CIL_00026N_0002ENSMUSG00000039682ENSMUST00000046122ENSMUST00000131289ENSMUST00000135413ENSMUST00000137699ENSMUST00000146811ENSMUSG00000049530ENSMUST00000053250
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026N_0001ENSG00000002549ENST00000226299ENST00000504614ENST00000606142ENST00000618908ENSG00000249488ENST00000509863ENSG00000249502ENST00000511010ENSG00000249581ENST00000511148CIL_00026N_0002ENSMUSG00000039682ENSMUST00000046122ENSMUST00000137699ENSMUSG00000049530ENSMUST00000053250
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000002549 ENST00000226299 10.205±0.00 N/A N/A N/A N/A 19.958±0.00 N/A 58.764±0.00 7.316±0.00 N/A N/A N/A N/A N/A
ENST00000503467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504614 N/A N/A N/A N/A N/A N/A N/A N/A 3.384±0.00 N/A N/A N/A N/A N/A
ENST00000507960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606142 7.346±0.00 N/A 5.597±0.00 6.825±0.00 17.944±0.00 7.540±0.00 10.399±6.71 31.129±0.00 7.047±2.09 19.690±5.26 7.477±6.18 14.274±10.05 41.901±13.90 40.816±0.00
ENST00000618908 24.943±0.00 59.094±0.00 N/A 21.401±19.19 35.055±0.00 2.365±0.00 5.194±3.09 N/A 5.317±2.67 36.173±0.00 2.777±0.34 8.989±6.95 12.719±2.46 17.549±11.55
ENSG00000249488 ENST00000509863 0.020±0.00 0.021±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A 0.021±0.00 N/A 0.028±0.00 N/A 0.033±0.00
ENSG00000249502 ENST00000511010 N/A N/A 0.609±0.00 0.227±0.03 0.491±0.21 0.450±0.43 0.081±0.00 0.638±0.62 0.981±0.00 1.113±0.86 N/A 0.097±0.06 N/A 0.483±0.05
ENSG00000249581 ENST00000511148 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A 0.097±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039682 ENSMUST00000046122 9.174±2.35 3.458±2.43 12.833±3.35 5.608±0.93 5.839±2.36 5.471±2.76 7.643±1.60 36.933±8.39 35.688±18.29 6.145±2.41 12.073±2.66 12.604±6.42 23.520±16.40 4.304±1.61
ENSMUST00000131289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137699 N/A N/A N/A 16.392±0.00 N/A N/A N/A N/A N/A N/A 5.891±0.00 52.116±0.00 13.837±0.00 21.222±0.00
ENSMUST00000146811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049530 ENSMUST00000053250 N/A N/A N/A 0.061±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00

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