C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase domain containing, cytoplasmic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294964 PKDCC-001 ENSG00000162878 9606 + 2:42048020-42058528 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000294964
Transcript ID Adipose Adrenal Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000294964 10.080±0.00 2.955±0.00 1.107±0.00 3.192±2.29 2.559±0.92 4.762±3.26 15.005±5.94 49.752±31.84 3.372±1.70 26.036±3.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029H CIL_00029H_0001 CGP 2:42048020-42332548

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0004672 ISS:IEA protein kinase activity
GO:0004715 IDA non-membrane spanning protein tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005576 IDA extracellular region
GO:0005794 ISS Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0015031 IEA protein transport
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0030154 IEA cell differentiation
GO:0030282 IEA bone mineralization
GO:0030501 ISS positive regulation of bone mineralization
GO:0032332 ISS positive regulation of chondrocyte differentiation
GO:0035264 IEA multicellular organism growth
GO:0042997 ISS negative regulation of Golgi to plasma membrane protein transport
GO:0048286 ISS lung alveolus development
GO:0048566 ISS embryonic digestive tract development
GO:0060021 ISS palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170794 Pkdcc-001 protein_coding Mus_musculus 0 2193
ENSMUST00000170758 Pkdcc-004 protein_coding Mus_musculus 0 726
ENSMUST00000166528 Pkdcc-003 processed_transcript Mus_musculus 0 409
ENSMUST00000168118 Pkdcc-005 processed_transcript Mus_musculus 0 377

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