C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002CZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179133-ENSG00000165312 CGP 9606 10:23267195-23442390
GeneTranscriptPositionBiotype
ENSG00000165312 (OTUD1)
OTU deubiquitinase 1
ENST00000376495 (OTUD1-001) 23439458-23442390 protein_coding
ENSG00000179133 (C10orf67)
chromosome 10 open reading frame 67
ENST00000323327 (C10orf67-001) 23316737-23344845 protein_coding
ENST00000376500 (C10orf67-002) 23267195-23343964 protein_coding
ENSG00000224215 (RP11-371A19.2)
ENST00000443224 (RP11-371A19.2-001) 23343957-23345181 antisense
CIL_0002CZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026734-ENSMUSG00000043415 CGP 10090 2:19462837-19660583
GeneTranscriptPositionBiotype
ENSMUSG00000026734 (4921504E06Rik)
RIKEN cDNA 4921504E06 gene
ENSMUST00000062060 (4921504E06Rik-001) 19462837-19553914 protein_coding
ENSMUST00000131199 (4921504E06Rik-002) 19493699-19553914 retained_intron
ENSMUSG00000043415 (Otud1)
OTU domain containing 1
ENSMUST00000052168 (Otud1-001) 19657752-19660583 protein_coding
ENSMUSG00000080227 (Gm13343)
predicted gene 13343
ENSMUST00000116474 (Gm13343-001) 19652244-19652348 processed_pseudogene
ENSMUSG00000086621 (Gm13348)
predicted gene 13348
ENSMUST00000147324 (Gm13348-001) 19634034-19636986 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CZ_0001ENSG00000165312ENST00000376495ENSG00000179133ENST00000323327ENST00000376500ENSG00000224215ENST00000443224CIL_0002CZ_0002ENSMUSG00000026734ENSMUST00000062060ENSMUST00000131199ENSMUSG00000043415ENSMUST00000052168ENSMUSG00000080227ENSMUST00000116474ENSMUSG00000086621ENSMUST00000147324
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CZ_0001ENSG00000165312ENST00000376495ENSG00000179133ENST00000323327ENST00000376500ENSG00000224215ENST00000443224CIL_0002CZ_0002ENSMUSG00000026734ENSMUST00000062060ENSMUST00000131199ENSMUSG00000043415ENSMUST00000052168ENSMUSG00000080227ENSMUST00000116474ENSMUSG00000086621ENSMUST00000147324
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165312 ENST00000376495 9.003±0.00 6.793±0.00 3.756±0.00 2.959±1.07 6.416±3.08 4.426±0.76 14.810±11.45 4.540±2.26 2.294±1.03 6.684±0.86 13.595±4.46 6.871±2.70 5.280±1.52 7.338±2.44
ENSG00000179133 ENST00000323327 N/A N/A 0.130±0.00 0.030±0.00 0.009±0.00 N/A 0.078±0.05 0.085±0.00 0.004±0.00 N/A N/A 0.058±0.01 0.025±0.00 N/A
ENST00000376500 N/A N/A N/A 0.138±0.00 0.041±0.00 0.091±0.00 N/A 0.136±0.00 N/A 0.464±0.19 0.152±0.00 0.254±0.18 0.035±0.00 5.863±3.14
ENSG00000224215 ENST00000443224 0.018±0.00 N/A N/A 0.072±0.00 N/A 0.077±0.00 0.216±0.00 N/A N/A 0.463±0.00 0.046±0.00 0.354±0.26 0.099±0.02 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026734 ENSMUST00000062060 N/A N/A N/A 0.016±0.01 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A 6.690±4.46
ENSMUST00000131199 N/A N/A N/A 0.018±0.00 N/A N/A N/A 0.084±0.01 N/A 0.061±0.00 N/A 0.026±0.01 N/A 5.617±3.99
ENSMUSG00000043415 ENSMUST00000052168 3.140±0.88 6.768±1.82 3.460±0.23 1.180±0.36 6.600±4.51 3.261±0.35 2.740±0.20 3.299±0.79 1.003±0.39 13.262±2.84 5.554±2.11 6.552±2.66 0.507±0.40 5.909±2.16
ENSMUSG00000080227 ENSMUST00000116474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.186±0.00
ENSMUSG00000086621 ENSMUST00000147324 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.080±0.00 1.456±0.59

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