C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052168 Otud1-001 ENSMUSG00000043415 10090 + 2:19657752-19660583 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052168 3.140±0.88 6.768±1.82 3.460±0.23 1.180±0.36 6.600±4.51 3.261±0.35 2.740±0.20 3.299±0.79 1.003±0.39 13.262±2.84 5.554±2.11 6.552±2.66 0.507±0.40 5.909±2.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088N CIL_00088N_0002 VISTA 2:19155026-19755689
CIL_0002CZ CIL_0002CZ_0002 CGP 2:19462837-19660583
CIL_0002D2 CIL_0002D2_0002 CGP 2:19657752-20810713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0070536 ISS protein K63-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376495 OTUD1-001 protein_coding Homo_sapiens 0 1334

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