C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU deubiquitinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376495 OTUD1-001 ENSG00000165312 9606 + 10:23439458-23442390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376495 9.003±0.00 6.793±0.00 3.756±0.00 2.959±1.07 6.416±3.08 4.426±0.76 14.810±11.45 4.540±2.26 2.294±1.03 6.684±0.86 13.595±4.46 6.871±2.70 5.280±1.52 7.338±2.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088N CIL_00088N_0001 VISTA 10:22901909-23502579
CIL_0002CZ CIL_0002CZ_0001 CGP 10:23267195-23442390
CIL_0002D2 CIL_0002D2_0001 CGP 10:23439458-24547848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IDA ubiquitin-specific protease activity
GO:0006508 IEA proteolysis
GO:0070536 IDA protein K63-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052168 Otud1-001 protein_coding Mus_musculus 0 1334

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