C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002FO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037191-ENSDARG00000010301 CGP 7955 20:6193301-6247957
GeneTranscriptPositionBiotype
ENSDARG00000010301 (b4galt6)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
ENSDART00000013343 (b4galt6-201) 6217379-6247957 protein_coding
ENSDART00000139168 (b4galt6-002) 6218163-6222863 retained_intron
ENSDART00000147451 (b4galt6-001) 6214800-6235035 protein_coding
ENSDARG00000037191 (ttr)
transthyretin (prealbumin, amyloidosis type I)
ENSDART00000054084 (ttr-001) 6193301-6208762 protein_coding
ENSDART00000136986 (ttr-002) 6193324-6208810 protein_coding
CIL_0002FO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118271-ENSG00000118276 CGP 9606 18:31591726-31685836
GeneTranscriptPositionBiotype
ENSG00000118271 (TTR)
transthyretin
ENST00000237014 (TTR-001) 31591726-31599011 protein_coding
ENST00000432547 (TTR-002) 31591877-31593545 retained_intron
ENST00000541025 (TTR-003) 31591877-31595849 retained_intron
ENST00000610404 (TTR-201) 31591767-31599021 protein_coding
ENST00000613781 (TTR-202) 31591767-31598675 protein_coding
ENSG00000118276 (B4GALT6)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
ENST00000237019 (B4GALT6-003) 31624663-31684571 protein_coding
ENST00000306851 (B4GALT6-001) 31623169-31684723 protein_coding
ENST00000383131 (B4GALT6-005) 31625485-31684504 protein_coding
ENST00000578114 (B4GALT6-004) 31622247-31658464 retained_intron
ENST00000579372 (B4GALT6-002) 31657975-31685836 protein_coding
ENSG00000259985 (RP11-549B18.1)
ENST00000565978 (RP11-549B18.1-001) 31685655-31686823 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FO_0001ENSDARG00000010301ENSDART00000013343ENSDART00000139168ENSDART00000147451ENSDARG00000037191ENSDART00000054084ENSDART00000136986CIL_0002FO_0002ENSG00000118271ENST00000237014ENST00000432547ENST00000541025ENST00000610404ENST00000613781ENSG00000118276ENST00000237019ENST00000306851ENST00000383131ENST00000578114ENST00000579372ENSG00000259985ENST00000565978
Region; Gene Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FO_0001ENSDARG00000010301ENSDART00000013343ENSDART00000147451ENSDARG00000037191ENSDART00000054084ENSDART00000136986CIL_0002FO_0002ENSG00000118271ENST00000237014ENST00000541025ENST00000613781ENSG00000118276ENST00000237019ENST00000306851ENST00000383131ENST00000578114ENSG00000259985ENST00000565978
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010301 ENSDART00000013343 N/A N/A 4.529±0.00 N/A N/A 0.817±0.23 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147451 N/A N/A 9.293±4.17 N/A N/A 1.525±0.00 1.335±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000037191 ENSDART00000054084 N/A N/A 0.634±0.00 N/A N/A 0.647±0.56 19.830±0.00 19.021±0.00 N/A 0.589±0.00 N/A N/A N/A
ENSDART00000136986 N/A N/A N/A N/A N/A 1.320±1.24 62.274±11.68 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118271 ENST00000237014 N/A N/A 388.698±207.12 1.804±1.66 0.559±0.50 0.340±0.00 883.915±883.14 170.253±169.86 0.013±0.00 N/A 0.908±0.35 2.045±1.11 0.683±0.44
ENST00000432547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541025 N/A N/A N/A 0.075±0.00 N/A 0.056±0.00 0.092±0.00 N/A N/A N/A N/A N/A N/A
ENST00000610404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613781 0.094±0.00 1.475±0.00 437.782±217.19 6.908±0.00 1.251±0.00 0.031±0.00 1831.920±1831.59 79.156±77.91 0.651±0.00 0.682±0.00 3.075±2.98 19.725±0.00 1.761±1.64
ENSG00000118276 ENST00000237019 N/A 0.374±0.00 1.554±0.00 0.311±0.00 0.863±0.00 0.423±0.20 0.911±0.00 0.674±0.00 0.072±0.00 0.041±0.00 1.022±0.00 N/A N/A
ENST00000306851 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A
ENST00000383131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.218±0.00
ENST00000578114 N/A 0.348±0.00 1.868±0.00 N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A N/A
ENST00000579372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259985 ENST00000565978 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.310±0.00 0.729±0.00 0.552±0.00 N/A

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