C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002HJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074372-ENSDARG00000033852 CGP 7955 1:8784918-8934592
GeneTranscriptPositionBiotype
ENSDARG00000033852 (mad1l1)
MAD1 mitotic arrest deficient-like 1 		ENSDART00000048610 (mad1l1-201) 8816888-8932348 protein_coding
ENSDART00000103478 (mad1l1-202) 8816885-8934573 protein_coding
ENSDART00000103479 (mad1l1-203) 8816885-8934573 protein_coding
ENSDART00000138592 (mad1l1-002) 8816886-8892959 processed_transcript
ENSDART00000147904 (mad1l1-001) 8815454-8934592 protein_coding
ENSDARG00000074372 (elfn1b)
extracellular leucine-rich repeat and fibronectin type III domain containing 1b 		ENSDART00000111131 (elfn1b-201) 8784918-8787329 protein_coding
CIL_0002HJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000225968-ENSG00000002822 CGP 9606 7:1688119-2233243
GeneTranscriptPositionBiotype
ENSG00000002822 (MAD1L1)
MAD1 mitotic arrest deficient-like 1 (yeast) 		ENST00000265854 (MAD1L1-201) 1815794-2230418 protein_coding
ENST00000399654 (MAD1L1-001) 1815794-2232974 protein_coding
ENST00000402746 (MAD1L1-002) 1815794-2232945 protein_coding
ENST00000406869 (MAD1L1-003) 1815794-2233243 protein_coding
ENST00000421113 (MAD1L1-014) 2014506-2107708 protein_coding
ENST00000429625 (MAD1L1-006) 2215957-2225598 protein_coding
ENST00000429779 (MAD1L1-004) 2222575-2232945 protein_coding
ENST00000437877 (MAD1L1-018) 1898200-1940549 protein_coding
ENST00000438959 (MAD1L1-016) 1957629-2080013 protein_coding
ENST00000444373 (MAD1L1-013) 1980486-2109601 protein_coding
ENST00000445959 (MAD1L1-007) 2213212-2223628 protein_coding
ENST00000450235 (MAD1L1-017) 1816082-1980791 protein_coding
ENST00000455998 (MAD1L1-005) 2219353-2230661 protein_coding
ENST00000459731 (MAD1L1-012) 2148374-2213234 processed_transcript
ENST00000464742 (MAD1L1-010) 2069194-2193475 processed_transcript
ENST00000468372 (MAD1L1-023) 1815795-1817085 processed_transcript
ENST00000469871 (MAD1L1-008) 2209948-2218043 processed_transcript
ENST00000477172 (MAD1L1-022) 1815816-1817499 processed_transcript
ENST00000481633 (MAD1L1-019) 1815793-1872756 processed_transcript
ENST00000483165 (MAD1L1-015) 2069194-2089251 processed_transcript
ENST00000486340 (MAD1L1-009) 2200265-2215927 processed_transcript
ENST00000491858 (MAD1L1-011) 2069194-2175385 processed_transcript
ENST00000496548 (MAD1L1-020) 1815795-1829664 processed_transcript
ENSG00000176349 (AC110781.3)
 ENST00000402221 (AC110781.3-001) 1838586-1849931 antisense
ENST00000480694 (AC110781.3-002) 1845300-1849931 antisense
ENSG00000205971 (AC074389.6)
 ENST00000382528 (AC074389.6-001) 1692810-1694325 lincRNA
ENST00000620671 (AC074389.6-201) 1693050-1693972 lincRNA
ENSG00000225968 (ELFN1)
extracellular leucine-rich repeat and fibronectin type III domain containing 1 		ENST00000424383 (ELFN1-001) 1688119-1747954 protein_coding
ENST00000561626 (ELFN1-201) 1709162-1747954 protein_coding
ENSG00000234977 (AC074389.7)
 ENST00000450458 (AC074389.7-001) 1691906-1692450 lincRNA
ENSG00000236081 (ELFN1-AS1)
ELFN1 antisense RNA 1 		ENST00000415399 (ELFN1-AS1-002) 1738983-1742291 lincRNA
ENST00000453348 (ELFN1-AS1-001) 1738630-1742272 lincRNA
CIL_0002HJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048988-ENSMUSG00000029554 CGP 10090 5:139907943-140321552
GeneTranscriptPositionBiotype
ENSMUSG00000029554 (Mad1l1)
MAD1 mitotic arrest deficient 1-like 1 		ENSMUST00000031534 (Mad1l1-001) 140008689-140321552 protein_coding
ENSMUST00000110829 (Mad1l1-002) 140008689-140321550 nonsense_mediated_decay
ENSMUST00000128579 (Mad1l1-004) 140088671-140115466 processed_transcript
ENSMUST00000129747 (Mad1l1-005) 140143912-140174659 processed_transcript
ENSMUST00000132832 (Mad1l1-003) 140166983-140262565 processed_transcript
ENSMUSG00000048988 (Elfn1)
leucine rich repeat and fibronectin type III, extracellular 1 		ENSMUST00000050519 (Elfn1-201) 139907943-139974711 protein_coding
ENSMUSG00000085673 (Gm16122)
predicted gene 16122 		ENSMUST00000142625 (Gm16122-001) 140074105-140085512 antisense
ENSMUSG00000087248 (Gm16120)
predicted gene 16120 		ENSMUST00000127990 (Gm16120-001) 140207385-140210751 antisense
ENSMUST00000133999 (Gm16120-002) 140209542-140210751 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HJ_0001ENSDARG00000033852ENSDART00000048610ENSDART00000103478ENSDART00000103479ENSDART00000138592ENSDART00000147904ENSDARG00000074372ENSDART00000111131CIL_0002HJ_0002ENSG00000002822ENST00000265854ENST00000399654ENST00000402746ENST00000406869ENST00000421113ENST00000429625ENST00000429779ENST00000437877ENST00000438959ENST00000444373ENST00000445959ENST00000450235ENST00000455998ENST00000459731ENST00000464742ENST00000468372ENST00000469871ENST00000477172ENST00000481633ENST00000483165ENST00000486340ENST00000491858ENST00000496548ENSG00000176349ENST00000402221ENST00000480694ENSG00000205971ENST00000382528ENST00000620671ENSG00000225968ENST00000424383ENST00000561626ENSG00000234977ENST00000450458ENSG00000236081ENST00000415399ENST00000453348CIL_0002HJ_0003ENSMUSG00000029554ENSMUST00000031534ENSMUST00000110829ENSMUST00000128579ENSMUST00000129747ENSMUST00000132832ENSMUSG00000048988ENSMUST00000050519ENSMUSG00000085673ENSMUST00000142625ENSMUSG00000087248ENSMUST00000127990ENSMUST00000133999
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002HJ_0001ENSDARG00000033852ENSDART00000048610ENSDART00000103478ENSDART00000103479ENSDART00000138592ENSDART00000147904ENSDARG00000074372ENSDART00000111131CIL_0002HJ_0002ENSG00000002822ENST00000265854ENST00000399654ENST00000402746ENST00000406869ENST00000429625ENST00000437877ENST00000438959ENST00000445959ENST00000450235ENST00000455998ENST00000464742ENST00000469871ENST00000491858ENSG00000176349ENST00000402221ENST00000480694ENSG00000205971ENST00000382528ENST00000620671ENSG00000225968ENST00000424383ENST00000561626ENSG00000234977ENST00000450458ENSG00000236081ENST00000415399ENST00000453348CIL_0002HJ_0003ENSMUSG00000029554ENSMUST00000031534ENSMUST00000110829ENSMUSG00000048988ENSMUST00000050519ENSMUSG00000085673ENSMUST00000142625ENSMUSG00000087248ENSMUST00000127990ENSMUST00000133999
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033852 ENSDART00000048610 N/A N/A N/A 2.121±1.05 N/A N/A 1.509±0.35 6.321±0.00 0.416±0.00 N/A 0.401±0.00 N/A N/A N/A
ENSDART00000103478 N/A N/A N/A N/A N/A N/A 1.356±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000103479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.00 N/A N/A N/A
ENSDART00000138592 N/A N/A N/A N/A N/A N/A 14.459±3.54 53.103±2.88 N/A N/A N/A N/A N/A N/A
ENSDART00000147904 N/A N/A N/A 0.254±0.09 N/A N/A 0.504±0.09 0.953±0.05 N/A N/A 0.224±0.00 N/A N/A N/A
ENSDARG00000074372 ENSDART00000111131 N/A N/A N/A 1.034±0.00 N/A N/A 0.043±0.00 N/A N/A N/A 0.228±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000002822 ENST00000265854 N/A N/A N/A N/A N/A N/A N/A N/A 0.521±0.00 N/A N/A 1.640±0.00 N/A N/A
ENST00000399654 4.746±0.00 4.526±0.00 0.828±0.00 2.492±0.54 4.387±0.00 1.279±0.60 1.433±1.01 4.209±0.00 0.639±0.04 2.428±1.57 8.607±0.00 6.364±2.75 6.971±0.70 10.422±4.37
ENST00000402746 N/A 3.773±0.00 N/A 2.364±0.00 0.465±0.00 N/A N/A 2.503±0.00 N/A 2.151±0.00 2.411±0.00 3.088±0.00 N/A N/A
ENST00000406869 N/A N/A N/A N/A N/A 0.989±0.11 N/A N/A N/A N/A N/A 7.720±0.00 N/A N/A
ENST00000421113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429625 N/A N/A 1.728±0.00 2.942±0.00 1.856±0.00 3.699±0.00 0.691±0.00 1.431±0.00 2.345±0.00 3.317±0.00 1.588±0.00 5.002±0.00 5.106±0.00 N/A
ENST00000429779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437877 N/A 4.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438959 N/A N/A 1.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445959 N/A N/A N/A N/A N/A 2.867±0.00 N/A N/A 1.287±0.00 N/A N/A 4.231±0.00 N/A N/A
ENST00000450235 N/A N/A N/A 4.783±0.00 N/A N/A N/A N/A N/A N/A 1.030±0.00 N/A N/A N/A
ENST00000455998 N/A N/A N/A N/A N/A N/A N/A 2.182±0.00 N/A N/A 2.265±0.00 N/A N/A N/A
ENST00000459731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464742 N/A N/A N/A N/A N/A N/A 1.868±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000468372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469871 N/A N/A N/A N/A N/A N/A N/A 2.822±0.00 N/A 3.397±0.00 N/A N/A N/A N/A
ENST00000477172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491858 N/A N/A N/A N/A N/A N/A N/A 3.102±0.00 N/A N/A N/A N/A N/A N/A
ENST00000496548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176349 ENST00000402221 0.008±0.00 0.041±0.00 N/A 0.121±0.05 0.076±0.00 0.143±0.00 N/A N/A 0.039±0.00 N/A N/A N/A N/A 0.039±0.00
ENST00000480694 N/A 0.018±0.00 0.109±0.00 0.044±0.00 N/A 0.013±0.00 N/A 0.123±0.00 0.053±0.00 N/A N/A 0.006±0.00 N/A 0.027±0.00
ENSG00000205971 ENST00000382528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.07
ENST00000620671 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00
ENSG00000225968 ENST00000424383 0.379±0.00 0.580±0.00 N/A 0.356±0.12 0.208±0.00 N/A 1.728±0.00 2.819±1.07 0.203±0.16 0.273±0.00 N/A 0.598±0.15 1.263±0.38 0.582±0.39
ENST00000561626 0.597±0.00 0.400±0.00 0.273±0.00 0.793±0.00 0.122±0.04 0.747±0.00 0.433±0.00 N/A 1.137±0.00 0.058±0.00 0.227±0.17 0.410±0.24 0.194±0.02 0.913±0.00
ENSG00000234977 ENST00000450458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.12
ENSG00000236081 ENST00000415399 N/A 0.154±0.00 N/A N/A N/A N/A N/A 1.380±0.00 0.040±0.00 N/A N/A 1.603±0.77 N/A 0.524±0.00
ENST00000453348 0.126±0.00 0.420±0.00 N/A N/A N/A 0.128±0.00 N/A N/A N/A N/A N/A 4.277±1.33 N/A 0.345±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029554 ENSMUST00000031534 4.772±0.82 1.380±0.24 5.454±0.94 10.536±2.77 2.395±1.01 3.145±0.55 1.578±0.33 3.145±0.57 5.405±4.75 3.668±0.09 1.676±0.34 10.078±5.12 10.332±5.61 6.276±2.89
ENSMUST00000110829 N/A N/A N/A N/A 1.844±0.00 N/A 0.624±0.08 N/A 1.356±0.80 N/A N/A 4.953±0.00 N/A 7.714±0.00
ENSMUST00000128579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048988 ENSMUST00000050519 0.267±0.01 13.998±6.19 0.132±0.00 2.875±1.65 0.140±0.06 0.106±0.04 0.065±0.03 3.077±1.02 0.057±0.05 5.105±2.98 0.016±0.00 1.234±0.50 0.102±0.04 13.148±5.85
ENSMUSG00000085673 ENSMUST00000142625 0.031±0.00 0.076±0.02 0.014±0.00 0.026±0.01 0.065±0.02 0.048±0.00 0.049±0.02 0.038±0.01 0.065±0.07 0.102±0.07 0.059±0.00 0.062±0.03 0.022±0.01 0.037±0.01
ENSMUSG00000087248 ENSMUST00000127990 0.083±0.00 N/A 0.019±0.00 0.033±0.00 0.135±0.02 N/A 0.039±0.00 N/A 0.043±0.02 0.161±0.03 N/A 0.047±0.00 0.096±0.06 N/A
ENSMUST00000133999 N/A N/A 0.020±0.00 0.051±0.00 N/A N/A N/A N/A 0.041±0.02 0.358±0.11 N/A 0.100±0.00 0.016±0.00 N/A

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