C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat and fibronectin type III, extracellular 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000048988 Elfn1 10090 + 5:139907943-139974711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050519 Elfn1-201 139907943-139974711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050519
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050519 0.267±0.01 13.998±6.19 0.132±0.00 2.875±1.65 0.140±0.06 0.106±0.04 0.065±0.03 3.077±1.02 0.057±0.05 5.105±2.98 0.016±0.00 1.234±0.50 0.102±0.04 13.148±5.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HI CIL_0002HI_0003 CGP 5:139823592-139974711
CIL_0002HJ CIL_0002HJ_0003 CGP 5:139907943-140321552

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0010923 ISS negative regulation of phosphatase activity
GO:0016021 IEA integral component of membrane
GO:0019902 ISS phosphatase binding
GO:0030425 IDA dendrite
GO:0050808 IMP synapse organization
GO:0060076 IDA excitatory synapse
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074372 elfn1b extracellular leucine-rich repeat and fibronectin type III domain containing 1b protein_coding Danio_rerio
ENSDARG00000078141 ELFN1 (2 of 2) extracellular leucine-rich repeat and fibronectin type III domain containing 1 protein_coding Danio_rerio
ENSG00000225968 ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1 protein_coding Homo_sapiens

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