C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: extracellular leucine-rich repeat and fibronectin type III domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000225968 ELFN1 9606 + 7:1688119-1747954 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000424383 ELFN1-001 1688119-1747954 protein_coding
  ENST00000561626 ELFN1-201 1709162-1747954 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424383ENST00000561626
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424383 0.379±0.00 0.580±0.00 N/A 0.356±0.12 0.208±0.00 N/A 1.728±0.00 2.819±1.07 0.203±0.16 0.273±0.00 N/A 0.598±0.15 1.263±0.38 0.582±0.39
ENST00000561626 0.597±0.00 0.400±0.00 0.273±0.00 0.793±0.00 0.122±0.04 0.747±0.00 0.433±0.00 N/A 1.137±0.00 0.058±0.00 0.227±0.17 0.410±0.24 0.194±0.02 0.913±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002HI CIL_0002HI_0002 CGP 7:1567330-1747954
CIL_0002HJ CIL_0002HJ_0002 CGP 7:1688119-2233243

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IEA protein binding
GO:0010923 IDA negative regulation of phosphatase activity
GO:0016021 IEA integral component of membrane
GO:0019902 IDA phosphatase binding
GO:0030425 ISS dendrite
GO:0050808 ISS synapse organization
GO:0060076 ISS excitatory synapse
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074372 elfn1b extracellular leucine-rich repeat and fibronectin type III domain containing 1b protein_coding Danio_rerio
ENSDARG00000078141 ELFN1 (2 of 2) extracellular leucine-rich repeat and fibronectin type III domain containing 1 protein_coding Danio_rerio
ENSMUSG00000048988 Elfn1 leucine rich repeat and fibronectin type III, extracellular 1 protein_coding Mus_musculus

Loading