C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130948-ENSG00000130958 CGP 9606 9:96235306-96383710
GeneTranscriptPositionBiotype
ENSG00000130948 (HSD17B3)
hydroxysteroid (17-beta) dehydrogenase 3 		ENST00000375262 (HSD17B3-201) 96235307-96302152 protein_coding
ENST00000375263 (HSD17B3-005) 96235306-96302152 protein_coding
ENST00000463517 (HSD17B3-006) 96250398-96254901 processed_transcript
ENST00000464104 (HSD17B3-001) 96235306-96250470 processed_transcript
ENST00000467499 (HSD17B3-004) 96235306-96239904 processed_transcript
ENST00000484816 (HSD17B3-003) 96239327-96244350 processed_transcript
ENST00000494814 (HSD17B3-002) 96235306-96249918 processed_transcript
ENSG00000130958 (SLC35D2)
solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 		ENST00000253270 (SLC35D2-001) 96320706-96383697 protein_coding
ENST00000375257 (SLC35D2-004) 96350750-96383682 protein_coding
ENST00000375259 (SLC35D2-201) 96320707-96383710 protein_coding
ENST00000482643 (SLC35D2-003) 96351107-96383680 processed_transcript
ENST00000490599 (SLC35D2-002) 96320706-96324169 processed_transcript
ENSG00000207276 (RNU6-1160P)
RNA, U6 small nuclear 1160, pseudogene 		ENST00000384546 (RNU6-1160P-201) 96256216-96256319 snRNA
ENSG00000232283 (RP11-240L7.4)
 ENST00000448857 (RP11-240L7.4-001) 96246462-96250393 antisense
ENSG00000265367 (AL160269.1)
 ENST00000577254 (AL160269.1-201) 96235823-96235922 miRNA
CIL_0002JA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033122-ENSMUSG00000033114 CGP 10090 13:64058274-64129330
GeneTranscriptPositionBiotype
ENSMUSG00000033114 (Slc35d2)
solute carrier family 35, member D2 		ENSMUST00000099441 (Slc35d2-201) 64096310-64129330 protein_coding
ENSMUSG00000033122 (Hsd17b3)
hydroxysteroid (17-beta) dehydrogenase 3 		ENSMUST00000039832 (Hsd17b3-201) 64058274-64089186 protein_coding
ENSMUST00000166224 (Hsd17b3-202) 64058274-64089201 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JA_0001ENSG00000130948ENST00000375262ENST00000375263ENST00000463517ENST00000464104ENST00000467499ENST00000484816ENST00000494814ENSG00000130958ENST00000253270ENST00000375257ENST00000375259ENST00000482643ENST00000490599ENSG00000207276ENST00000384546ENSG00000232283ENST00000448857ENSG00000265367ENST00000577254CIL_0002JA_0002ENSMUSG00000033114ENSMUST00000099441ENSMUSG00000033122ENSMUST00000039832ENSMUST00000166224
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JA_0001ENSG00000130948ENST00000375262ENST00000375263ENST00000463517ENST00000464104ENST00000494814ENSG00000130958ENST00000253270ENST00000375259ENST00000482643ENST00000490599ENSG00000207276ENST00000384546ENSG00000232283ENST00000448857ENSG00000265367ENST00000577254CIL_0002JA_0002ENSMUSG00000033114ENSMUST00000099441ENSMUSG00000033122ENSMUST00000039832ENSMUST00000166224
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130948 ENST00000375262 N/A 0.034±0.00 0.214±0.00 0.466±0.00 N/A 0.242±0.09 0.081±0.00 1.121±0.00 0.154±0.00 0.503±0.00 N/A 0.630±0.00 0.108±0.00 23.746±17.60
ENST00000375263 0.121±0.00 0.072±0.00 N/A 0.369±0.00 0.077±0.00 N/A N/A 0.950±0.00 0.073±0.00 0.157±0.00 N/A 0.181±0.01 N/A 16.205±0.00
ENST00000463517 N/A N/A N/A N/A N/A 0.284±0.00 0.379±0.32 N/A N/A N/A N/A N/A N/A N/A
ENST00000464104 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494814 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A 0.329±0.00 N/A 7.151±0.00
ENSG00000130958 ENST00000253270 7.969±0.00 4.994±0.00 1.248±0.00 2.515±1.33 2.616±0.00 5.849±1.26 3.111±1.81 11.312±4.16 15.539±0.00 3.820±0.13 1.168±0.21 9.875±2.63 13.311±1.00 4.249±1.01
ENST00000375257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375259 N/A N/A N/A 2.680±1.70 1.170±0.00 N/A N/A 1.931±0.00 N/A 3.976±0.00 N/A N/A N/A 2.065±0.00
ENST00000482643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A N/A
ENST00000490599 7.016±0.00 6.537±0.00 2.264±0.00 N/A 1.963±0.00 7.231±0.00 N/A 9.240±0.00 7.512±0.00 4.607±0.00 N/A 14.864±12.14 10.365±5.11 4.009±0.36
ENSG00000207276 ENST00000384546 N/A N/A N/A N/A 0.172±0.00 N/A N/A 0.519±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000232283 ENST00000448857 0.080±0.00 0.012±0.00 N/A 0.080±0.00 0.078±0.00 0.100±0.00 0.033±0.00 N/A 0.206±0.00 N/A N/A 0.108±0.05 N/A N/A
ENSG00000265367 ENST00000577254 0.541±0.00 0.564±0.00 N/A 2.427±0.00 0.299±0.00 0.265±0.00 0.536±0.00 N/A N/A N/A N/A 45.530±0.00 N/A 0.519±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033114 ENSMUST00000099441 1.580±0.30 2.625±1.20 3.219±0.10 0.167±0.09 1.566±0.57 1.841±0.66 0.376±0.07 2.723±0.95 6.776±4.69 2.221±0.24 0.246±0.05 1.174±0.57 1.622±0.91 0.205±0.12
ENSMUSG00000033122 ENSMUST00000039832 N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.20 N/A N/A 0.212±0.08 0.051±0.05 13.337±11.79
ENSMUST00000166224 0.041±0.00 N/A N/A 0.067±0.02 N/A N/A N/A N/A 0.125±0.12 N/A N/A 0.448±0.10 N/A 8.849±2.13

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