C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000253270 SLC35D2-001 ENSG00000130958 9606 - 9:96320706-96383697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000253270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000253270 7.969±0.00 4.994±0.00 1.248±0.00 2.515±1.33 2.616±0.00 5.849±1.26 3.111±1.81 11.312±4.16 15.539±0.00 3.820±0.13 1.168±0.21 9.875±2.63 13.311±1.00 4.249±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z5 CIL_0008Z5_0001 VISTA 9:96215463-96816013
CIL_0002JA CIL_0002JA_0001 CGP 9:96235306-96383710
CIL_0007HD CIL_0007HD_0002 CGP 9:96320706-96418329

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005338 NAS nucleotide-sugar transmembrane transporter activity
GO:0005575 ND cellular_component
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0008150 ND biological_process
GO:0008643 IEA carbohydrate transport
GO:0016021 IEA integral component of membrane
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055085 TAS:IEA transmembrane transport
GO:1901264 NAS carbohydrate derivative transport
GO:1901679 NAS nucleotide transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099441 Slc35d2-201 protein_coding Mus_musculus 0 1122

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