C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SHC (Src homology 2 domain containing) transforming protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375835 SHC3-001 ENSG00000148082 9606 - 9:89013145-89178767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375835
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375835 0.227±0.00 0.138±0.04 0.266±0.17 0.056±0.01 0.044±0.00 0.203±0.19 0.367±0.07 0.027±0.00 0.189±0.07 0.081±0.02 0.179±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000077 CIL_000077_0002 CGP 9:88991447-89178767
CIL_0002K1 CIL_0002K1_0001 CGP 9:89013145-89316703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007265 TAS Ras protein signal transduction
GO:0007417 IEA central nervous system development
GO:0007611 IEA learning or memory
GO:0008286 TAS insulin receptor signaling pathway
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0048011 TAS neurotrophin TRK receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021898 Shc3-201 protein_coding Mus_musculus 0 1633

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