C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002KP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091163-ENSDARG00000079996 CGP 7955 9:156242-176280
GeneTranscriptPositionBiotype
ENSDARG00000079996 (stac3)
SH3 and cysteine rich domain 3
ENSDART00000111936 (stac3-001) 164630-176280 protein_coding
ENSDART00000140642 (stac3-002) 169904-173812 protein_coding
ENSDARG00000091163 (ndufa4l2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
ENSDART00000142497 (ndufa4l2-001) 156242-160683 protein_coding
CIL_0002KP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185633-ENSG00000185482 CGP 9606 12:57234903-57251193
GeneTranscriptPositionBiotype
ENSG00000185482 (STAC3)
SH3 and cysteine rich domain 3
ENST00000332782 (STAC3-001) 57243453-57251193 protein_coding
ENST00000546246 (STAC3-004) 57243654-57251185 protein_coding
ENST00000553294 (STAC3-006) 57249019-57251186 retained_intron
ENST00000553489 (STAC3-005) 57248126-57251188 protein_coding
ENST00000554003 (STAC3-007) 57244757-57248364 retained_intron
ENST00000554578 (STAC3-003) 57243453-57251184 protein_coding
ENST00000557176 (STAC3-002) 57243459-57251186 nonsense_mediated_decay
ENSG00000185633 (NDUFA4L2)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
ENST00000393825 (NDUFA4L2-201) 57234905-57240692 protein_coding
ENST00000554503 (NDUFA4L2-001) 57234903-57237338 protein_coding
ENST00000554688 (NDUFA4L2-004) 57236189-57237085 retained_intron
ENST00000555173 (NDUFA4L2-003) 57234911-57237100 retained_intron
ENST00000556234 (NDUFA4L2-009) 57237256-57240703 processed_transcript
ENST00000556732 (NDUFA4L2-005) 57235080-57237092 protein_coding
ENST00000557276 (NDUFA4L2-008) 57239546-57240715 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KP_0001ENSDARG00000079996ENSDART00000111936ENSDART00000140642ENSDARG00000091163ENSDART00000142497CIL_0002KP_0002ENSG00000185482ENST00000332782ENST00000546246ENST00000553294ENST00000553489ENST00000554003ENST00000554578ENST00000557176ENSG00000185633ENST00000393825ENST00000554503ENST00000554688ENST00000555173ENST00000556234ENST00000556732ENST00000557276
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KP_0001ENSDARG00000079996ENSDART00000111936ENSDART00000140642ENSDARG00000091163ENSDART00000142497CIL_0002KP_0002ENSG00000185482ENST00000332782ENST00000546246ENST00000553294ENST00000554578ENSG00000185633ENST00000393825ENST00000554503ENST00000555173ENST00000556732
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079996 ENSDART00000111936 N/A N/A N/A 0.089±0.03 N/A N/A 0.167±0.08 3.611±0.00 N/A N/A 33.468±0.00 N/A N/A N/A
ENSDART00000140642 N/A N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091163 ENSDART00000142497 N/A N/A N/A 14.024±4.75 N/A N/A 5.057±2.89 6.462±1.95 0.108±0.00 N/A 5.554±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000185482 ENST00000332782 N/A N/A N/A N/A 28.566±0.00 N/A N/A N/A N/A N/A 222.156±172.50 N/A N/A 19.155±3.88
ENST00000546246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 185.528±0.00 N/A N/A N/A
ENST00000553294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 117.745±0.00 N/A N/A N/A
ENST00000553489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.373±0.00 N/A N/A N/A
ENST00000557176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185633 ENST00000393825 N/A N/A N/A 1.309±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554503 N/A N/A N/A 8.248±0.00 N/A N/A 1.030±0.00 N/A 0.497±0.00 26.583±0.00 N/A 15.768±0.00 138.440±36.26 7.941±5.32
ENST00000554688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555173 44.340±0.00 36.681±0.00 N/A 13.902±0.00 47.191±0.00 41.400±0.00 10.972±0.00 N/A N/A 23.811±0.00 1.772±0.00 N/A N/A 11.587±6.97
ENST00000556234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556732 22.212±0.00 N/A N/A N/A N/A N/A 10.295±9.39 N/A N/A 9.726±9.00 N/A N/A 56.593±16.87 N/A
ENST00000557276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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