C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3 and cysteine rich domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000332782 STAC3-001 ENSG00000185482 9606 - 12:57243453-57251193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleTestisENST00000332782
Transcript ID Breast Muscle Testis
ENST00000332782 28.566±0.00 222.156±172.50 19.155±3.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KP CIL_0002KP_0002 CGP 12:57234903-57251193

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003009 IMP skeletal muscle contraction
GO:0005515 IEA protein binding
GO:0007274 IMP neuromuscular synaptic transmission
GO:0035556 IEA intracellular signal transduction
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding
GO:0048741 IEA skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035839 Stac3-002 protein_coding Mus_musculus 0 1498
ENSMUST00000160019 Stac3-001 protein_coding Mus_musculus 0 1498
ENSMUST00000160760 Stac3-005 retained_intron Mus_musculus 0 237
ENSMUST00000162302 Stac3-004 retained_intron Mus_musculus 8e-36 156

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