C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002LF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087456-ENSDARG00000028971 CGP 7955 20:50361663-50398350
GeneTranscriptPositionBiotype
ENSDARG00000028971 (cpsf2)
cleavage and polyadenylation specific factor 2 		ENSDART00000047212 (cpsf2-201) 50365142-50398344 protein_coding
ENSDART00000137725 (cpsf2-001) 50374145-50398350 protein_coding
ENSDARG00000087456 (NDUFB1)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa 		ENSDART00000123634 (NDUFB1-201) 50361663-50362039 protein_coding
CIL_0002LF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183648-ENSG00000165934 CGP 9606 14:92116122-92172145
GeneTranscriptPositionBiotype
ENSG00000165934 (CPSF2)
cleavage and polyadenylation specific factor 2, 100kDa 		ENST00000298875 (CPSF2-001) 92121937-92172145 protein_coding
ENST00000553427 (CPSF2-004) 92121972-92134103 protein_coding
ENST00000554290 (CPSF2-005) 92121985-92135432 nonsense_mediated_decay
ENST00000555244 (CPSF2-007) 92155179-92161246 protein_coding
ENST00000556622 (CPSF2-006) 92154021-92155153 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LF_0001ENSDARG00000028971ENSDART00000047212ENSDART00000137725ENSDARG00000087456ENSDART00000123634CIL_0002LF_0002ENSG00000165934ENST00000298875ENST00000553427ENST00000554290ENST00000555244ENST00000556622
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LF_0001ENSDARG00000028971ENSDART00000047212ENSDART00000137725ENSDARG00000087456ENSDART00000123634CIL_0002LF_0002ENSG00000165934ENST00000298875ENST00000555244
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028971 ENSDART00000047212 N/A N/A N/A 5.468±1.60 N/A N/A 5.386±0.65 5.653±0.00 2.177±0.00 N/A 1.974±0.00 N/A N/A N/A
ENSDART00000137725 N/A N/A N/A 0.825±0.73 N/A N/A 1.266±0.00 0.925±0.45 N/A N/A 0.742±0.00 N/A N/A N/A
ENSDARG00000087456 ENSDART00000123634 N/A N/A N/A 121.028±8.57 N/A N/A 201.873±48.80 113.890±0.00 9.391±0.00 N/A 183.124±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165934 ENST00000298875 2.613±0.00 2.676±0.00 1.643±0.00 1.829±0.00 2.501±0.78 2.379±0.42 1.301±0.28 1.897±0.30 2.207±0.65 1.423±0.80 1.814±0.89 2.237±0.26 2.077±0.67 4.901±0.90
ENST00000553427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555244 9.271±0.00 10.505±0.00 N/A 9.911±0.00 7.649±0.00 9.613±0.00 6.160±0.00 6.866±2.56 7.186±0.00 11.248±0.00 6.930±3.12 7.636±1.69 7.111±3.64 23.998±2.78
ENST00000556622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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