C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002NO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133424-ENSG00000175329 CGP 9606 22:33162226-35087387
GeneTranscriptPositionBiotype
ENSG00000133424 (LARGE)
like-glycosyltransferase 		ENST00000354992 (LARGE-001) 33272861-33920421 protein_coding
ENST00000397394 (LARGE-201) 33273076-33920428 protein_coding
ENST00000402320 (LARGE-002) 33273089-33920414 protein_coding
ENST00000413114 (LARGE-004) 33650368-33922841 protein_coding
ENST00000421232 (LARGE-015) 33166387-33221751 processed_transcript
ENST00000421768 (LARGE-010) 33337769-33572253 protein_coding
ENST00000423375 (LARGE-006) 33650632-33873387 protein_coding
ENST00000430220 (LARGE-008) 33650367-33861624 protein_coding
ENST00000432776 (LARGE-007) 33650595-33873405 protein_coding
ENST00000434071 (LARGE-005) 33650449-33889228 protein_coding
ENST00000462606 (LARGE-009) 33650375-33657216 processed_transcript
ENST00000476315 (LARGE-011) 33562913-33565019 processed_transcript
ENST00000494763 (LARGE-003) 33650440-33922596 processed_transcript
ENST00000608642 (LARGE-013) 33162226-33384227 protein_coding
ENST00000609799 (LARGE-012) 33166734-33384227 protein_coding
ENST00000610186 (LARGE-014) 33166005-33384227 protein_coding
ENSG00000175329 (ISX)
intestine-specific homeobox 		ENST00000308700 (ISX-001) 35066136-35087387 protein_coding
ENST00000404699 (ISX-002) 35066136-35087386 protein_coding
ENSG00000224404 (LL22NC03-13G6.2)
 ENST00000450365 (LL22NC03-13G6.2-001) 34208141-34209262 lincRNA
ENSG00000224973 (LARGE-AS1)
LARGE antisense RNA 1 		ENST00000416275 (LARGE-AS1-007) 33744129-33750683 antisense
ENST00000424291 (LARGE-AS1-001) 33725027-33750843 antisense
ENST00000438159 (LARGE-AS1-002) 33725040-33750742 antisense
ENST00000445892 (LARGE-AS1-006) 33744009-33750657 retained_intron
ENST00000448275 (LARGE-AS1-004) 33725069-33732502 antisense
ENST00000450974 (LARGE-AS1-005) 33725072-33744192 antisense
ENST00000453336 (LARGE-AS1-003) 33725014-33737775 antisense
ENSG00000227895 (ISX-AS1)
ISX antisense RNA 1 		ENST00000427881 (ISX-AS1-001) 34997719-35002862 lincRNA
ENSG00000230741 (SC22CB-1D7.1)
 ENST00000453924 (SC22CB-1D7.1-001) 33320865-33322813 antisense
ENSG00000232081 (LARGE-IT1)
LARGE intronic transcript 1 (non-protein coding) 		ENST00000445391 (LARGE-IT1-001) 33723832-33724912 sense_intronic
ENSG00000234891 (RP1-288L1.5)
 ENST00000423712 (RP1-288L1.5-001) 34703126-34704885 lincRNA
ENSG00000235485 (RP1-101G11.2)
 ENST00000457251 (RP1-101G11.2-001) 34589085-34591278 processed_pseudogene
ENSG00000236052 (LL22NC03-86D4.1)
 ENST00000412218 (LL22NC03-86D4.1-001) 34017473-34188425 lincRNA
ENSG00000237316 (RP1-288L1.4)
 ENST00000440858 (RP1-288L1.4-001) 34711908-34724919 lincRNA
ENSG00000253007 (SNORA76)
Small nucleolar RNA SNORA76 		ENST00000517198 (SNORA76.1-203) 33704786-33704920 snoRNA
ENSG00000279003 (LL22NC03-22D1.1)
 ENST00000624601 (LL22NC03-22D1.1-001) 34477746-34506771 lincRNA
ENSG00000279582 (SC22CB-109E1.1)
 ENST00000623290 (SC22CB-109E1.1-001) 35051326-35061427 lincRNA
ENSG00000280356 (RP1-101G11.3)
 ENST00000624442 (RP1-101G11.3-001) 34641179-34651862 lincRNA
CIL_0002NO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004383-ENSMUSG00000031621 CGP 10090 8:72814599-74893506
GeneTranscriptPositionBiotype
ENSMUSG00000004383 (Large)
like-glycosyltransferase 		ENSMUST00000004497 (Large-201) 72814599-73352556 protein_coding
ENSMUST00000119826 (Large-001) 72814599-73353540 protein_coding
ENSMUST00000146249 (Large-002) 73045064-73098913 retained_intron
ENSMUSG00000031621 (Isx)
intestine specific homeobox 		ENSMUST00000034034 (Isx-001) 74873173-74893506 protein_coding
ENSMUST00000174427 (Isx-002) 74873540-74893147 protein_coding
ENSMUSG00000047657 (Crry-ps)
complement receptor related protein, pseudogene 		ENSMUST00000079090 (Crry-ps-201) 73750301-73750783 processed_pseudogene
ENSMUSG00000076199 (Gm23255)
predicted gene, 23255 		ENSMUST00000102244 (Gm23255-201) 73641396-73641505 miRNA
ENSMUSG00000079011 (Gm11033)
predicted gene 11033 		ENSMUST00000127757 (Gm11033-001) 74590987-74833947 lincRNA
ENSMUST00000137218 (Gm11033-002) 74827992-74833920 lincRNA
ENSMUST00000156185 (Gm11033-003) 74784169-74833937 lincRNA
ENSMUSG00000089447 (Gm22532)
predicted gene, 22532 		ENSMUST00000158822 (Gm22532-201) 73175119-73175258 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133424 ENST00000354992 N/A N/A 0.420±0.00 N/A 0.933±0.00 1.398±0.52 3.002±0.00 0.808±0.00 0.705±0.00 0.431±0.00 1.004±0.00 1.985±0.41 0.831±0.23 1.367±0.29
ENST00000397394 6.259±0.00 9.279±0.00 N/A 11.405±5.91 2.613±0.94 4.334±1.25 17.465±15.75 3.459±2.18 2.343±1.85 4.897±0.00 12.943±11.74 8.949±4.16 1.657±0.89 3.882±3.03
ENST00000402320 N/A N/A N/A N/A N/A 5.786±0.00 N/A N/A 2.654±0.00 N/A 1.558±0.00 0.726±0.00 N/A N/A
ENST00000413114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434071 N/A N/A N/A N/A N/A N/A N/A 4.797±0.00 N/A N/A N/A N/A N/A N/A
ENST00000462606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494763 N/A N/A 9.268±0.00 26.850±0.00 13.762±0.00 12.279±0.00 17.724±0.00 9.272±0.00 27.616±0.00 6.746±0.00 20.049±0.00 13.359±0.00 N/A N/A
ENST00000608642 N/A N/A N/A N/A 0.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.679±0.00
ENST00000610186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175329 ENST00000308700 N/A N/A N/A N/A N/A 2.404±0.57 N/A N/A N/A N/A N/A 1.238±0.66 N/A 0.055±0.00
ENST00000404699 N/A N/A 0.017±0.00 N/A 1.540±0.00 2.315±1.37 N/A N/A N/A N/A N/A 1.475±0.92 N/A 0.005±0.00
ENSG00000224404 ENST00000450365 N/A N/A N/A 1.293±1.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.05
ENSG00000224973 ENST00000416275 0.123±0.00 N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A
ENST00000424291 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A 1.056±0.00
ENST00000438159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.881±0.00
ENST00000445892 N/A 0.045±0.00 N/A 0.167±0.00 1.604±0.00 0.571±0.00 0.385±0.00 3.143±0.00 N/A N/A 3.953±0.00 N/A N/A 8.302±0.00
ENST00000448275 N/A 0.132±0.00 N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A 3.845±1.22
ENST00000450974 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A 5.831±1.30
ENST00000453336 0.047±0.00 0.018±0.00 N/A 0.126±0.05 0.073±0.00 N/A 0.068±0.00 N/A N/A N/A N/A 0.029±0.03 0.013±0.00 N/A
ENSG00000227895 ENST00000427881 N/A N/A N/A 4.032±0.00 N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230741 ENST00000453924 N/A N/A N/A N/A N/A 0.160±0.03 N/A N/A N/A 0.369±0.00 N/A 0.161±0.00 N/A 0.102±0.00
ENSG00000232081 ENST00000445391 N/A 0.073±0.00 1.577±0.00 N/A N/A 0.972±0.00 0.195±0.00 N/A N/A 0.514±0.00 N/A N/A N/A N/A
ENSG00000234891 ENST00000423712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00
ENSG00000235485 ENST00000457251 N/A N/A N/A 0.019±0.00 N/A N/A N/A 0.244±0.00 N/A N/A 0.022±0.00 0.009±0.00 N/A 0.040±0.02
ENSG00000236052 ENST00000412218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.35
ENSG00000237316 ENST00000440858 N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.177±0.00
ENSG00000253007 ENST00000517198 N/A N/A N/A 6.868±0.00 46.295±0.00 6.891±0.00 12.952±12.74 29.889±0.00 6.019±0.00 56.362±0.00 N/A N/A N/A N/A
ENSG00000279003 ENST00000624601 0.018±0.00 0.038±0.00 N/A 0.020±0.01 0.017±0.01 0.009±0.01 0.016±0.00 0.021±0.00 0.005±0.00 0.018±0.01 0.003±0.00 0.011±0.01 0.003±0.00 0.030±0.01
ENSG00000279582 ENST00000623290 0.049±0.00 0.132±0.00 0.275±0.00 0.089±0.00 0.048±0.04 0.019±0.00 0.032±0.00 0.203±0.00 0.078±0.00 0.029±0.01 0.030±0.00 0.007±0.00 0.003±0.00 0.031±0.01
ENSG00000280356 ENST00000624442 0.039±0.00 0.078±0.00 N/A 0.080±0.00 0.067±0.00 0.031±0.00 0.018±0.01 0.041±0.00 0.025±0.00 0.055±0.02 0.016±0.00 0.013±0.00 N/A 0.041±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004383 ENSMUST00000004497 7.476±1.20 2.117±0.64 5.442±0.44 11.037±3.24 5.299±2.66 2.683±1.42 8.975±1.70 3.209±1.06 0.771±0.34 4.251±1.10 2.958±0.62 7.862±1.92 2.123±0.80 0.495±0.07
ENSMUST00000119826 3.301±1.31 3.651±0.52 3.654±0.00 4.701±1.64 2.384±0.88 2.858±0.75 2.603±0.34 1.271±0.77 0.421±0.19 1.981±0.93 2.099±0.57 3.997±2.37 1.127±0.66 0.434±0.21
ENSMUST00000146249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031621 ENSMUST00000034034 N/A N/A 0.004±0.00 0.016±0.00 N/A 43.615±15.99 0.089±0.00 N/A 0.031±0.02 0.027±0.01 N/A 0.121±0.06 0.193±0.12 N/A
ENSMUST00000174427 0.023±0.00 0.121±0.02 0.022±0.00 N/A N/A 15.576±0.71 0.033±0.01 N/A N/A 0.029±0.00 N/A 0.143±0.12 0.470±0.40 N/A
ENSMUSG00000047657 ENSMUST00000079090 0.092±0.00 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.401±0.00 N/A 0.203±0.00
ENSMUSG00000076199 ENSMUST00000102244 N/A N/A 55.767±13.97 N/A N/A N/A N/A N/A N/A N/A N/A 14.273±0.00 N/A N/A
ENSMUSG00000079011 ENSMUST00000127757 0.045±0.02 0.117±0.00 N/A 0.508±0.00 0.050±0.02 N/A 0.079±0.03 0.027±0.00 0.294±0.04 0.038±0.00 N/A 0.209±0.05 0.080±0.04 0.100±0.08
ENSMUST00000137218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.08
ENSMUST00000156185 0.051±0.03 0.074±0.00 0.003±0.00 0.024±0.01 0.072±0.04 0.804±0.30 0.084±0.06 0.075±0.03 6.567±3.89 0.390±0.26 N/A 0.064±0.05 0.070±0.06 0.061±0.01
ENSMUSG00000089447 ENSMUST00000158822 N/A N/A N/A N/A N/A N/A N/A N/A 3.213±0.00 N/A N/A N/A 1.637±0.00 N/A

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