C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002O3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000096060-ENSG00000157343 CGP 9606 6:35573585-35749079
GeneTranscriptPositionBiotype
ENSG00000096060 (FKBP5)
FK506 binding protein 5 		ENST00000357266 (FKBP5-001) 35573590-35688937 protein_coding
ENST00000536438 (FKBP5-201) 35573585-35728583 protein_coding
ENST00000539068 (FKBP5-202) 35573585-35688915 protein_coding
ENST00000542713 (FKBP5-203) 35580557-35688942 protein_coding
ENSG00000157343 (ARMC12)
armadillo repeat containing 12 		ENST00000288065 (ARMC12-003) 35737082-35748908 protein_coding
ENST00000373866 (ARMC12-002) 35737087-35749079 protein_coding
ENST00000373869 (ARMC12-001) 35737032-35748911 protein_coding
ENST00000471400 (ARMC12-004) 35737092-35738509 nonsense_mediated_decay
ENSG00000212579 (SNORA40)
Small nucleolar RNA SNORA40 		ENST00000391277 (SNORA40.1-208) 35651818-35651945 snoRNA
ENSG00000218749 (RP3-340B19.5)
 ENST00000407266 (RP3-340B19.5-001) 35607628-35607934 processed_pseudogene
ENSG00000223063 (AL157823.1)
 ENST00000411131 (AL157823.1-201) 35701003-35701138 miRNA
ENSG00000232909 (RP3-510O8.4)
 ENST00000452048 (RP3-510O8.4-001) 35733867-35736947 antisense
ENSG00000265527 (MIR5690)
microRNA 5690 		ENST00000583739 (MIR5690-201) 35664717-35664789 miRNA
CIL_0002O3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024222-ENSMUSG00000024223 CGP 10090 17:28399095-28538954
GeneTranscriptPositionBiotype
ENSMUSG00000024222 (Fkbp5)
FK506 binding protein 5 		ENSMUST00000079413 (Fkbp5-001) 28399095-28486149 protein_coding
ENSMUST00000114792 (Fkbp5-004) 28399097-28517524 protein_coding
ENSMUST00000143685 (Fkbp5-003) 28402698-28428629 processed_transcript
ENSMUST00000147716 (Fkbp5-005) 28497343-28507406 retained_intron
ENSMUST00000153744 (Fkbp5-002) 28415961-28441722 protein_coding
ENSMUST00000177939 (Fkbp5-201) 28399105-28517524 protein_coding
ENSMUSG00000024223 (Armc12)
armadillo repeat containing 12 		ENSMUST00000025060 (Armc12-001) 28530860-28538954 protein_coding
ENSMUSG00000066170 (E230001N04Rik)
RIKEN cDNA E230001N04 gene 		ENSMUST00000095448 (E230001N04Rik-201) 28523293-28525347 lincRNA
ENSMUST00000181029 (E230001N04Rik-001) 28523257-28525347 lincRNA
ENSMUSG00000088022 (Gm22146)
predicted gene, 22146 		ENSMUST00000157397 (Gm22146-201) 28446861-28447148 misc_RNA
ENSMUSG00000095947 (Gm25195)
predicted gene, 25195 		ENSMUST00000177656 (Gm25195-201) 28526332-28526457 miRNA
ENSMUSG00000097714 (Gm20109)
predicted gene, 20109 		ENSMUST00000180802 (Gm20109-001) 28522381-28523148 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002O3_0001ENSG00000096060ENST00000357266ENST00000536438ENST00000539068ENST00000542713ENSG00000157343ENST00000288065ENST00000373866ENST00000373869ENST00000471400ENSG00000212579ENST00000391277ENSG00000218749ENST00000407266ENSG00000223063ENST00000411131ENSG00000232909ENST00000452048ENSG00000265527ENST00000583739CIL_0002O3_0002ENSMUSG00000024222ENSMUST00000079413ENSMUST00000114792ENSMUST00000143685ENSMUST00000147716ENSMUST00000153744ENSMUST00000177939ENSMUSG00000024223ENSMUST00000025060ENSMUSG00000066170ENSMUST00000095448ENSMUST00000181029ENSMUSG00000088022ENSMUST00000157397ENSMUSG00000095947ENSMUST00000177656ENSMUSG00000097714ENSMUST00000180802
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002O3_0001ENSG00000096060ENST00000357266ENST00000536438ENST00000542713ENSG00000157343ENST00000288065ENST00000373869ENST00000471400ENSG00000212579ENST00000391277ENSG00000218749ENST00000407266ENSG00000223063ENST00000411131ENSG00000232909ENST00000452048ENSG00000265527ENST00000583739CIL_0002O3_0002ENSMUSG00000024222ENSMUST00000079413ENSMUST00000114792ENSMUST00000143685ENSMUST00000147716ENSMUSG00000024223ENSMUST00000025060ENSMUSG00000066170ENSMUST00000095448ENSMUST00000181029ENSMUSG00000088022ENSMUST00000157397ENSMUSG00000095947ENSMUST00000177656ENSMUSG00000097714ENSMUST00000180802
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096060 ENST00000357266 97.914±0.00 32.827±0.00 2.102±0.00 17.969±17.13 12.573±4.28 25.892±22.44 46.970±45.91 92.379±73.21 45.403±33.22 9.823±4.78 82.626±61.85 11.675±5.56 13.430±3.47 24.837±8.31
ENST00000536438 N/A N/A N/A 0.646±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542713 N/A N/A N/A N/A 1.432±0.00 N/A 0.334±0.00 1.574±0.00 2.516±0.00 3.043±0.00 N/A N/A N/A N/A
ENSG00000157343 ENST00000288065 0.172±0.00 0.435±0.00 N/A 0.356±0.23 N/A 0.161±0.00 N/A 0.868±0.00 0.260±0.00 N/A N/A 0.808±0.20 0.051±0.03 14.803±0.72
ENST00000373866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373869 N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A 0.110±0.00 N/A N/A 0.351±0.25 0.023±0.00 6.080±0.03
ENST00000471400 N/A N/A N/A N/A 0.052±0.00 0.536±0.00 N/A N/A 0.413±0.00 N/A N/A 0.680±0.00 0.275±0.00 N/A
ENSG00000212579 ENST00000391277 0.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218749 ENST00000407266 0.479±0.00 N/A N/A 0.253±0.00 N/A N/A 0.351±0.00 0.353±0.05 0.650±0.00 N/A 0.133±0.00 0.882±0.00 N/A N/A
ENSG00000223063 ENST00000411131 N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000232909 ENST00000452048 0.055±0.00 0.650±0.00 N/A 0.092±0.02 0.128±0.00 0.058±0.00 0.082±0.00 0.695±0.00 0.260±0.00 N/A N/A 0.179±0.05 0.080±0.00 0.301±0.08
ENSG00000265527 ENST00000583739 N/A 4.510±0.00 N/A 0.382±0.00 N/A N/A 0.677±0.00 N/A 0.309±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024222 ENSMUST00000079413 3.084±0.66 17.633±8.68 6.502±1.26 9.462±2.38 7.508±3.61 40.687±8.11 1.799±0.95 6.814±0.40 10.227±5.14 5.364±2.13 9.691±5.77 95.732±21.31 8.929±4.01 5.897±2.16
ENSMUST00000114792 N/A N/A N/A N/A 0.556±0.00 N/A N/A N/A N/A N/A N/A 29.028±7.94 N/A 2.431±0.00
ENSMUST00000143685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 134.299±3.81 N/A N/A
ENSMUST00000147716 N/A N/A N/A N/A 0.635±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024223 ENSMUST00000025060 N/A 0.088±0.03 0.016±0.00 0.036±0.01 0.134±0.06 0.051±0.00 0.145±0.03 0.091±0.03 0.020±0.01 0.054±0.01 N/A 0.180±0.11 0.315±0.20 244.320±99.37
ENSMUSG00000066170 ENSMUST00000095448 0.215±0.10 0.477±0.00 0.272±0.00 0.213±0.01 0.467±0.09 0.368±0.20 0.138±0.03 0.128±0.07 0.089±0.05 0.129±0.00 0.202±0.06 0.497±0.15 0.239±0.16 0.387±0.14
ENSMUST00000181029 N/A 0.372±0.12 0.325±0.00 0.204±0.00 0.903±0.17 1.013±0.39 0.030±0.00 0.144±0.03 0.501±0.46 0.383±0.24 0.412±0.17 0.711±0.10 0.286±0.07 0.855±0.28
ENSMUSG00000088022 ENSMUST00000157397 N/A 0.744±0.41 N/A N/A 1.021±0.77 N/A N/A 0.208±0.00 0.378±0.33 N/A N/A 1.248±0.92 0.157±0.00 0.816±0.25
ENSMUSG00000095947 ENSMUST00000177656 1327.923±580.81 N/A 40.609±15.30 10.276±1.60 1144.040±0.00 1176.630±0.00 1075.030±0.00 1027.560±0.00 315.269±442.64 N/A N/A 12.512±3.86 11.299±3.81 N/A
ENSMUSG00000097714 ENSMUST00000180802 0.265±0.04 0.239±0.12 0.203±0.05 0.357±0.32 0.206±0.12 0.205±0.09 0.287±0.09 0.152±0.09 0.088±0.06 0.311±0.09 0.168±0.05 0.353±0.09 0.133±0.09 0.166±0.00

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