C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinetochore associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031366 Kntc1-201 ENSMUSG00000029414 10090 + 5:123749726-123821593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031366 0.351±0.36 0.277±0.03 0.150±0.01 1.251±0.82 0.168±0.09 0.778±0.35 0.038±0.01 0.118±0.04 2.657±3.00 0.142±0.10 0.014±0.01 1.291±0.44 1.917±1.50 2.906±1.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PE CIL_0002PE_0002 CGP 5:123728426-123821593
CIL_0002PF CIL_0002PF_0002 CGP 5:123749726-123865516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000922 IEA spindle pole
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005828 IEA kinetochore microtubule
GO:0005886 IEA plasma membrane
GO:0007067 IEA mitotic nuclear division
GO:0007093 IEA mitotic cell cycle checkpoint
GO:0015629 IEA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333479 KNTC1-001 protein_coding Homo_sapiens 0 5424
ENST00000377192 KNTC1-007 retained_intron Homo_sapiens 0 721
ENST00000436959 KNTC1-003 protein_coding Homo_sapiens 0 1151
ENST00000450485 KNTC1-002 protein_coding Homo_sapiens 0 1454
ENST00000539013 KNTC1-010 retained_intron Homo_sapiens 0 298
ENST00000541427 KNTC1-011 retained_intron Homo_sapiens 0 472
ENST00000546125 KNTC1-009 protein_coding Homo_sapiens 0 320

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