C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006094-ENSDARG00000030530 CGP 7955 20:42595349-42720218
GeneTranscriptPositionBiotype
ENSDARG00000006094 (igf2r)
insulin-like growth factor 2 receptor 		ENSDART00000061101 (igf2r-001) 42596780-42692387 protein_coding
ENSDART00000153441 (igf2r-002) 42595349-42616925 protein_coding
ENSDARG00000030530 (slc22a2)
solute carrier family 22 (organic cation transporter), member 2 		ENSDART00000048890 (slc22a2-001) 42700606-42720218 protein_coding
CIL_0002QF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197081-ENSG00000175003 CGP 9606 6:159969099-160158718
GeneTranscriptPositionBiotype
ENSG00000175003 (SLC22A1)
solute carrier family 22 (organic cation transporter), member 1 		ENST00000324965 (SLC22A1-006) 160121936-160158551 protein_coding
ENST00000366963 (SLC22A1-001) 160121789-160158718 protein_coding
ENST00000457470 (SLC22A1-007) 160121936-160158582 protein_coding
ENST00000460902 (SLC22A1-002) 160121936-160158716 nonsense_mediated_decay
ENST00000478607 (SLC22A1-003) 160155954-160158718 retained_intron
ENST00000539263 (SLC22A1-004) 160121899-160158582 nonsense_mediated_decay
ENST00000540443 (SLC22A1-005) 160129761-160134007 protein_coding
ENSG00000197081 (IGF2R)
insulin-like growth factor 2 receptor 		ENST00000356956 (IGF2R-001) 159969099-160106551 protein_coding
ENST00000464636 (IGF2R-002) 160010338-160024693 retained_intron
ENST00000475584 (IGF2R-006) 160096447-160113507 processed_transcript
ENST00000475834 (IGF2R-005) 160085061-160090340 protein_coding
ENST00000487607 (IGF2R-004) 160073416-160074061 retained_intron
ENSG00000213073 (RP11-288H12.3)
 ENST00000366273 (RP11-288H12.3-001) 160093423-160093993 transcribed_processed_pseudogene
ENST00000569097 (RP11-288H12.3-002) 160093082-160096212 processed_transcript
ENSG00000268257 (AIRN)
antisense of IGF2R non-protein coding RNA 		ENST00000601203 (AIRN-001) 160003291-160007664 antisense
ENST00000609176 (AIRN-002) 160003291-160007664 antisense
ENSG00000270949 (RP11-288H12.4)
 ENST00000604521 (RP11-288H12.4-001) 160108374-160111504 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QF_0001ENSDARG00000006094ENSDART00000061101ENSDART00000153441ENSDARG00000030530ENSDART00000048890CIL_0002QF_0002ENSG00000175003ENST00000324965ENST00000366963ENST00000457470ENST00000460902ENST00000478607ENST00000539263ENST00000540443ENSG00000197081ENST00000356956ENST00000464636ENST00000475584ENST00000475834ENST00000487607ENSG00000213073ENST00000366273ENST00000569097ENSG00000268257ENST00000601203ENST00000609176ENSG00000270949ENST00000604521
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QF_0001ENSDARG00000006094ENSDART00000061101ENSDARG00000030530ENSDART00000048890CIL_0002QF_0002ENSG00000175003ENST00000324965ENST00000366963ENST00000457470ENST00000460902ENST00000478607ENST00000539263ENST00000540443ENSG00000197081ENST00000356956ENSG00000213073ENST00000366273ENST00000569097ENSG00000268257ENST00000601203ENST00000609176ENSG00000270949ENST00000604521
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006094 ENSDART00000061101 N/A N/A N/A 1.400±0.00 N/A N/A 2.641±0.00 1.240±0.00 0.516±0.00 N/A N/A N/A N/A N/A
ENSDART00000153441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000030530 ENSDART00000048890 N/A N/A N/A 1.976±0.58 N/A N/A 1.741±1.15 194.355±44.37 29.116±0.00 N/A 8.199±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175003 ENST00000324965 N/A N/A N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.104±0.00
ENST00000366963 0.054±0.00 N/A N/A N/A N/A N/A N/A 158.320±0.00 69.965±0.00 N/A N/A 0.242±0.00 N/A N/A
ENST00000457470 N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.063±0.00 N/A N/A 0.137±0.00 N/A
ENST00000460902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 0.077±0.02 N/A N/A
ENST00000478607 N/A N/A N/A N/A N/A 0.433±0.00 0.123±0.00 0.555±0.00 236.432±0.00 N/A 0.121±0.00 0.324±0.00 0.257±0.00 0.364±0.00
ENST00000539263 N/A 0.134±0.00 N/A N/A 0.064±0.00 N/A N/A 0.429±0.00 62.843±62.79 0.057±0.00 N/A 0.084±0.02 0.069±0.03 0.179±0.00
ENST00000540443 N/A 0.290±0.00 0.369±0.00 N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A 0.096±0.01 N/A 0.138±0.00
ENSG00000197081 ENST00000356956 30.650±0.00 12.839±0.00 6.543±0.00 2.948±1.58 10.188±5.12 14.684±0.00 11.726±8.61 11.040±7.33 9.250±5.26 8.725±1.85 31.202±19.66 23.180±11.25 12.033±1.65 9.936±2.74
ENST00000464636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213073 ENST00000366273 N/A N/A 1.383±0.00 N/A N/A N/A 0.274±0.00 N/A N/A 0.797±0.00 0.093±0.00 1.421±0.00 N/A N/A
ENST00000569097 0.315±0.00 0.699±0.00 0.700±0.00 0.078±0.03 0.552±0.27 0.788±0.45 0.109±0.03 0.761±0.26 0.458±0.17 0.617±0.23 0.053±0.00 1.250±0.91 0.204±0.08 0.426±0.31
ENSG00000268257 ENST00000601203 0.014±0.00 0.034±0.00 N/A 0.086±0.00 N/A 0.125±0.00 0.032±0.01 0.047±0.01 0.080±0.00 0.014±0.00 0.027±0.00 0.205±0.23 0.017±0.00 0.021±0.01
ENST00000609176 N/A N/A N/A N/A 0.046±0.04 N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000270949 ENST00000604521 2.044±0.00 1.546±0.00 0.661±0.00 0.340±0.26 0.984±0.53 0.630±0.09 0.285±0.15 1.115±0.38 0.718±0.48 0.381±0.03 0.836±0.76 2.238±1.48 0.499±0.08 0.489±0.11

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