C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002QJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074236-ENSDARG00000068613 CGP 7955 20:4178673-4283800
GeneTranscriptPositionBiotype
ENSDARG00000068613 ()
ENSDART00000099298 () 4256994-4283800 protein_coding
ENSDARG00000074236 ()
ENSDART00000114830 () 4178673-4254826 protein_coding
ENSDART00000125798 () 4178673-4254826 protein_coding
CIL_0002QJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000074706-ENSG00000153721 CGP 9606 6:154154496-154510659
GeneTranscriptPositionBiotype
ENSG00000074706 (IPCEF1)
interaction protein for cytohesin exchange factors 1
ENST00000265198 (IPCEF1-001) 154154609-154356766 protein_coding
ENST00000367220 (IPCEF1-004) 154159612-154356735 protein_coding
ENST00000422970 (IPCEF1-005) 154158074-154330081 protein_coding
ENST00000470622 (IPCEF1-003) 154154496-154159516 processed_transcript
ENST00000484827 (IPCEF1-002) 154199829-154214313 retained_intron
ENST00000517438 (IPCEF1-011) 154200018-154246856 protein_coding
ENST00000518162 (IPCEF1-012) 154222961-154247580 retained_intron
ENST00000519091 (IPCEF1-013) 154199723-154219189 processed_transcript
ENST00000519190 (IPCEF1-009) 154214257-154247422 protein_coding
ENST00000519344 (IPCEF1-006) 154159682-154247682 protein_coding
ENST00000519405 (IPCEF1-010) 154212835-154247231 protein_coding
ENST00000520261 (IPCEF1-008) 154246599-154356792 protein_coding
ENST00000522590 (IPCEF1-007) 154158924-154213330 retained_intron
ENSG00000237593 (RP11-317B3.2)
ENST00000456309 (RP11-317B3.2-001) 154216931-154217489 processed_pseudogene
CIL_0002QJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000064065-ENSMUSG00000015202 CGP 10090 10:6885796-7212237
GeneTranscriptPositionBiotype
ENSMUSG00000015202 (Cnksr3)
Cnksr family member 3
ENSMUST00000015346 (Cnksr3-001) 7119063-7212237 protein_coding
ENSMUST00000150282 (Cnksr3-002) 7119063-7135506 protein_coding
ENSMUSG00000064065 (Ipcef1)
interaction protein for cytohesin exchange factors 1
ENSMUST00000078070 (Ipcef1-004) 6890439-6979711 protein_coding
ENSMUST00000086896 (Ipcef1-005) 6911543-7052478 protein_coding
ENSMUST00000105617 (Ipcef1-002) 6885796-6980376 protein_coding
ENSMUST00000144622 (Ipcef1-001) 6917554-6980465 processed_transcript
ENSMUST00000145156 (Ipcef1-006) 6919835-7023167 protein_coding
ENSMUST00000149708 (Ipcef1-008) 6919915-6980534 processed_transcript
ENSMUST00000151960 (Ipcef1-007) 6956062-7000444 protein_coding
ENSMUST00000154998 (Ipcef1-003) 6917554-6980314 processed_transcript
ENSMUST00000170680 (Ipcef1-201) 6911543-7023185 protein_coding
ENSMUSG00000081926 (Gm15536)
predicted gene 15536
ENSMUST00000121411 (Gm15536-001) 7038661-7038774 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QJ_0001ENSDARG00000068613ENSDART00000099298ENSDARG00000074236ENSDART00000114830ENSDART00000125798CIL_0002QJ_0002ENSG00000074706ENST00000265198ENST00000367220ENST00000422970ENST00000470622ENST00000484827ENST00000517438ENST00000518162ENST00000519091ENST00000519190ENST00000519344ENST00000519405ENST00000520261ENST00000522590ENSG00000237593ENST00000456309CIL_0002QJ_0003ENSMUSG00000015202ENSMUST00000015346ENSMUST00000150282ENSMUSG00000064065ENSMUST00000078070ENSMUST00000086896ENSMUST00000105617ENSMUST00000144622ENSMUST00000145156ENSMUST00000149708ENSMUST00000151960ENSMUST00000154998ENSMUST00000170680ENSMUSG00000081926ENSMUST00000121411
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QJ_0001ENSDARG00000068613ENSDART00000099298ENSDARG00000074236ENSDART00000114830ENSDART00000125798CIL_0002QJ_0002ENSG00000074706ENST00000265198ENSG00000237593ENST00000456309CIL_0002QJ_0003ENSMUSG00000015202ENSMUST00000015346ENSMUSG00000064065ENSMUST00000078070ENSMUST00000105617ENSMUST00000144622ENSMUST00000145156ENSMUST00000151960ENSMUST00000154998ENSMUST00000170680ENSMUSG00000081926ENSMUST00000121411
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000068613 ENSDART00000099298 N/A N/A N/A 0.609±0.30 N/A N/A 1.830±0.92 16.586±8.56 0.098±0.00 N/A 0.762±0.00 N/A N/A N/A
ENSDARG00000074236 ENSDART00000114830 N/A N/A N/A 0.294±0.26 N/A N/A 1.483±0.63 0.459±0.00 0.061±0.00 N/A 0.996±0.00 N/A N/A N/A
ENSDART00000125798 N/A N/A N/A 0.294±0.26 N/A N/A 1.483±0.63 0.459±0.00 0.061±0.00 N/A 0.996±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074706 ENST00000265198 N/A N/A N/A 8.576±2.83 N/A N/A N/A 1.551±0.00 N/A 0.646±0.00 N/A 0.254±0.00 0.218±0.03 N/A
ENST00000367220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237593 ENST00000456309 N/A 0.306±0.00 N/A 0.341±0.00 0.394±0.00 0.797±0.00 0.042±0.00 N/A N/A 0.066±0.00 N/A 0.094±0.03 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015202 ENSMUST00000015346 4.465±0.71 4.169±1.48 14.715±0.42 1.354±0.31 3.806±1.13 10.451±1.63 4.408±1.16 5.548±1.09 2.592±0.85 5.817±1.17 0.911±0.18 6.490±1.24 2.361±1.08 2.028±0.46
ENSMUST00000150282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064065 ENSMUST00000078070 N/A N/A N/A 4.933±0.00 N/A 0.261±0.00 N/A N/A N/A N/A N/A 0.369±0.17 0.014±0.00 0.040±0.00
ENSMUST00000086896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105617 N/A 0.043±0.03 N/A 0.798±0.70 1.247±0.79 0.070±0.03 0.062±0.00 N/A 0.130±0.11 0.338±0.12 0.052±0.08 0.160±0.06 0.014±0.01 0.011±0.01
ENSMUST00000144622 N/A N/A N/A N/A 0.855±0.00 0.048±0.01 N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENSMUST00000145156 N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A 0.246±0.00 0.028±0.00 N/A
ENSMUST00000149708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.868±0.00 N/A N/A
ENSMUST00000154998 N/A 0.047±0.01 N/A N/A N/A N/A 0.043±0.01 N/A 0.026±0.00 0.197±0.00 N/A N/A N/A 0.016±0.00
ENSMUST00000170680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.12 N/A N/A
ENSMUSG00000081926 ENSMUST00000121411 N/A N/A 675.163±0.00 141.238±24.90 N/A N/A N/A N/A 196.085±2.33 N/A 21.008±0.00 N/A N/A N/A

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