C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interaction protein for cytohesin exchange factors 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265198 IPCEF1-001 ENSG00000074706 9606 - 6:154154609-154356766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungOvaryPlacentaENST00000265198
Transcript ID Brain Kidney Lung Ovary Placenta
ENST00000265198 8.576±2.83 1.551±0.00 0.646±0.00 0.254±0.00 0.218±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QK CIL_0002QK_0002 CGP 6:153004459-154246867
CIL_00055K CIL_00055K_0001 CGP 6:154010496-154356792
CIL_0002QJ CIL_0002QJ_0002 CGP 6:154154496-154510659

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004601 ISS peroxidase activity
GO:0005344 NAS oxygen transporter activity
GO:0006979 ISS response to oxidative stress
GO:0015671 NAS oxygen transport
GO:0055114 ISS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105617 Ipcef1-002 protein_coding Mus_musculus 0 1077
ENSMUST00000078070 Ipcef1-004 protein_coding Mus_musculus 0 983
ENSMUST00000144622 Ipcef1-001 processed_transcript Mus_musculus 0 752
ENSMUST00000154998 Ipcef1-003 processed_transcript Mus_musculus 0 713
ENSMUST00000145156 Ipcef1-006 protein_coding Mus_musculus 0 671
ENSMUST00000149708 Ipcef1-008 processed_transcript Mus_musculus 0 507
ENSMUST00000151960 Ipcef1-007 protein_coding Mus_musculus 0 377

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