C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158813-ENSG00000147160 CGP 9606 X:69616067-70049938
GeneTranscriptPositionBiotype
ENSG00000147160 (AWAT2)
acyl-CoA wax alcohol acyltransferase 2 		ENST00000276101 (AWAT2-001) 70040542-70049938 protein_coding
ENST00000440401 (AWAT2-003) 70041480-70043583 nonsense_mediated_decay
ENST00000443056 (AWAT2-002) 70042912-70043994 retained_intron
ENSG00000211991 (MIR676)
microRNA 676 		ENST00000390702 (MIR676-201) 70022829-70022939 miRNA
ENSG00000212434 (U3)
Small nucleolar RNA U3 		ENST00000391132 (U3.1-226) 69692956-69693155 snoRNA
ENSG00000233229 (CNOT7P1)
CCR4-NOT transcription complex, subunit 7 pseudogene 1 		ENST00000429006 (CNOT7P1-001) 69937166-69938017 processed_pseudogene
ENSG00000272351 (5S_rRNA)
5S ribosomal RNA 		ENST00000606950 (5S_rRNA.1-213) 69672479-69672597 rRNA
CIL_0002RK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059327-ENSMUSG00000031220 CGP 10090 X:99975606-100442717
GeneTranscriptPositionBiotype
ENSMUSG00000031220 (Awat2)
acyl-CoA wax alcohol acyltransferase 2 		ENSMUST00000033567 (Awat2-001) 100402221-100412587 protein_coding
ENSMUST00000147103 (Awat2-002) 100402226-100442717 protein_coding
ENSMUSG00000051582 (Otud6a)
OTU domain containing 6A 		ENSMUST00000060241 (Otud6a-001) 100429013-100429885 protein_coding
ENSMUSG00000080813 (Gm14828)
predicted gene 14828 		ENSMUST00000119381 (Gm14828-001) 100337514-100338668 processed_pseudogene
ENSMUSG00000082907 (Gm14832)
predicted gene 14832 		ENSMUST00000121289 (Gm14832-001) 100156635-100156956 processed_pseudogene
ENSMUSG00000083936 (Gm14829)
predicted gene 14829 		ENSMUST00000121499 (Gm14829-001) 100329692-100330829 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RK_0001ENSG00000147160ENST00000276101ENST00000440401ENST00000443056ENSG00000211991ENST00000390702ENSG00000212434ENST00000391132ENSG00000233229ENST00000429006ENSG00000272351ENST00000606950CIL_0002RK_0002ENSMUSG00000031220ENSMUST00000033567ENSMUST00000147103ENSMUSG00000051582ENSMUST00000060241ENSMUSG00000080813ENSMUST00000119381ENSMUSG00000082907ENSMUST00000121289ENSMUSG00000083936ENSMUST00000121499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RK_0001ENSG00000147160ENST00000276101ENST00000440401ENSG00000211991ENST00000390702ENSG00000212434ENST00000391132ENSG00000233229ENST00000429006ENSG00000272351ENST00000606950CIL_0002RK_0002ENSMUSG00000031220ENSMUST00000033567ENSMUST00000147103ENSMUSG00000051582ENSMUST00000060241ENSMUSG00000080813ENSMUST00000119381ENSMUSG00000082907ENSMUST00000121289ENSMUSG00000083936ENSMUST00000121499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147160 ENST00000276101 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A 0.060±0.00 N/A 0.127±0.00
ENST00000440401 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.34 N/A N/A N/A N/A
ENST00000443056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211991 ENST00000390702 N/A N/A N/A N/A N/A N/A 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000212434 ENST00000391132 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000233229 ENST00000429006 N/A N/A N/A 0.013±0.00 N/A 0.011±0.00 N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A
ENSG00000272351 ENST00000606950 N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031220 ENSMUST00000033567 0.226±0.09 0.367±0.16 N/A 0.025±0.00 0.395±0.27 0.223±0.09 0.042±0.03 0.238±0.11 0.183±0.10 0.145±0.02 0.112±0.04 0.498±0.22 0.197±0.12 0.195±0.00
ENSMUST00000147103 0.126±0.04 N/A 0.133±0.00 0.048±0.02 0.272±0.09 0.299±0.10 N/A 0.135±0.04 0.446±0.15 0.415±0.09 0.054±0.00 0.440±0.26 0.108±0.03 0.653±0.63
ENSMUSG00000051582 ENSMUST00000060241 0.122±0.07 0.129±0.00 0.016±0.01 0.061±0.04 0.057±0.00 0.132±0.00 N/A N/A 0.060±0.05 0.044±0.00 N/A 0.202±0.06 0.056±0.04 2.113±0.93
ENSMUSG00000080813 ENSMUST00000119381 0.032±0.00 N/A 0.013±0.00 0.017±0.01 0.035±0.00 N/A 0.043±0.01 N/A 0.017±0.01 N/A N/A N/A 0.004±0.00 1.553±0.24
ENSMUSG00000082907 ENSMUST00000121289 0.192±0.00 0.215±0.00 0.087±0.03 0.149±0.00 N/A N/A N/A 0.172±0.00 0.059±0.01 0.392±0.00 0.316±0.00 N/A 0.075±0.00 N/A
ENSMUSG00000083936 ENSMUST00000121499 0.057±0.03 N/A 0.019±0.01 0.043±0.00 0.039±0.00 0.053±0.00 0.058±0.03 0.061±0.00 0.026±0.03 0.087±0.01 N/A 0.127±0.01 0.031±0.02 N/A

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