C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CCR4-NOT transcription complex, subunit 7 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429006 CNOT7P1-001 ENSG00000233229 9606 - X:69937166-69938017 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryENST00000429006
Transcript ID Brain Colon Ovary
ENST00000429006 0.013±0.00 0.011±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YI CIL_0000YI_0002 CGP X:69505241-70039469
CIL_0002RK CIL_0002RK_0001 CGP X:69616067-70049938

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149992 Cnot7-005 protein_coding Mus_musculus 0 1170
ENSMUST00000132032 Cnot7-006 protein_coding Mus_musculus 0 1170
ENSMUST00000034012 Cnot7-001 protein_coding Mus_musculus 0 1170
ENSMUST00000135269 Cnot7-003 protein_coding Mus_musculus 0 893
ENSMUST00000132740 Cnot7-011 retained_intron Mus_musculus 0 819
ENSMUST00000142455 Cnot7-009 processed_transcript Mus_musculus 0 699
ENSMUST00000144970 Cnot7-004 retained_intron Mus_musculus 0 686
ENSMUST00000146280 Cnot7-002 processed_transcript Mus_musculus 0 448
ENSMUST00000132200 Cnot7-010 processed_transcript Mus_musculus 0 420
ENSMUST00000128237 Cnot7-007 processed_transcript Mus_musculus 7e-39 165
ENSMUST00000164934 Zdhhc2-004 processed_transcript Mus_musculus 4e-16 90
ENSMUST00000128166 Zdhhc2-003 protein_coding Mus_musculus 4e-16 90

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